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Schema
Citing CMDGA
Clear Filters
Annotation type
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
50
kidney
30
renal cortex interstitium
30
right kidney
29
renal pelvis
27
left kidney
9
left renal pelvis
9
right renal pelvis
8
left renal cortex interstitium
7
HEK293
7
right renal cortex interstitium
5
epithelial cell of proximal tubule
5
kidney tubule cell
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
kidney epithelial cell
4
renal cortical epithelial cell
3
ACHN
3
Caki2
3
G401
3
RCC 7860
3
kidney glomerular epithelial cell
3
renal cell carcinoma
2
HEK293T
2
cortex of kidney
2
kidney capillary endothelial cell
2
kidney epithelium
1
left kidney
1
RCC
1
nephron tubule
1
renal connecting tubule
1
renal glomerulus
Organ
3
kidney
Life stage
2
adult
Date released
2
September, 2022
1
February, 2021
Software used
1
chromhmm
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
accessible chromatin
target gene predictions
Showing 3 of 3 results
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Download
FileSet
DSR155SVZ
released
Annotation file set
: Candidate regulatory elements for BSS01481 renal cell carcinoma from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887WYK
released
Annotation file set
: Chromatin states for BSS01481 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR283ABW
released
Annotation file set
: Histone modifications annotation for Kidney Carcinoma,_Renal_Cell from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP