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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
target gene predictions
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
22
adipose tissue
19
subcutaneous adipose tissue
17
adipocyte
15
fibroblast
15
foreskin fibroblast
14
omental fat pad
12
fibroblast of lung
12
mesenchymal stem cell
10
osteoblast
9
fibroblast of cardiac tissue
8
fibroblast of dermis
8
hepatic stellate cell
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
6
skin fibroblast
6
subcutaneous abdominal adipose tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
GM23248
5
Mesangial Cell
5
cardiac fibroblast
5
cartilage tissue
5
mesangial cell
5
pancreatic stellate cell
4
bone tissue
4
fibroblast of the aortic adventitia
4
pericyte cell
4
visceral abdominal adipose tissue
3
HT1080
3
adult endothelial progenitor cell
3
fibroblast of gingiva
3
fibroblast of peridontal ligament
3
fibroblast of the conjunctiva
3
pancreatic quiescent stellate cell
3
preadipocyte
3
stromal cell of bone marrow
2
cardiac fibroblast
2
adipose tissue derived mesenchymal stem cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
articular chondrocyte
2
brain pericyte
2
chondrocyte
2
columnar chondrocyte
2
pulmonary interstitial fibroblast
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Preadipose SGBS cell line (adipocyte)
1
activated pancreatic stellate cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
embryonic fibroblast
1
fat cell
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
Organ
5
connective tissue
5
limb
5
skin of body
Life stage
3
adult
Date released
3
February, 2021
2
September, 2022
Software used
2
macs
1
chromhmm
1
encode-ccres
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
accessible chromatin
target gene predictions
Showing 5 of 5 results
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Download
FileSet
DSR449IDP
released
Annotation file set
: Candidate regulatory elements for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR689DCS
released
Annotation file set
: Chromatin states for BSS00476 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR229GNK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM23248
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR263KHK
released
Annotation file set
: Histone modifications annotation for Epidermis Dermal_fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337EJT
released
Annotation file set
: Binding sites annotation for Epidermis Dermal_fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP