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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
4
H4
Disease term
3
glioma
Organ
349
epithelium
273
kidney
195
brain
144
connective tissue
121
vasculature
114
intestine
100
blood vessel
88
musculature of body
85
lung
76
large intestine
75
bodily fluid
75
pancreas
69
heart
69
limb
68
liver
66
blood
63
adipose tissue
59
skin of body
48
mammary gland
42
stomach
38
prostate gland
34
artery
32
bone element
29
esophagus
25
adrenal gland
24
small intestine
22
gonad
20
nerve
20
spleen
19
uterus
17
thyroid gland
14
lymph node
14
lymphoid tissue
13
ovary
10
breast
9
testis
9
vagina
8
lymphatic vessel
5
mouth
5
spinal cord
5
urinary bladder
4
embryo
3
nose
2
eye
1
pituitary gland
1
tongue
1
vein
Life stage
108
embryonic
8
unknown
4
adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
accessible chromatin
annotation_type_category!
Expression arrays
Showing 4 of 4 results
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Download
FileSet
DSR828FIT
released
Annotation file set
: Candidate regulatory elements for BSS00481 H4 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR985SXX
released
Annotation file set
: Target gene predictions for BSS00481 H4 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR168KQA
released
Annotation file set
: Chromatin states for BSS00481 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR369LGF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE H4
Lab:
AMP-T2D consortium
Project:
AMP