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Schema
Citing CMDGA
Clear Filters
Annotation type
accessible chromatin
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
85
heart
83
stomach
71
brain
71
kidney
68
lung
66
muscle of arm
62
small intestine
61
adrenal gland
59
placenta
56
muscle of leg
55
large intestine
54
muscle of back
52
left lung
47
thymus
45
liver
44
right lung
41
right kidney
39
renal cortex interstitium
38
islet of Langerhans
38
renal pelvis
36
left kidney
32
spleen
31
heart left ventricle
30
adipose tissue
30
spinal cord
24
body of pancreas
22
sigmoid colon
22
tibial nerve
20
caudate nucleus
20
ovary
19
psoas muscle
19
subcutaneous adipose tissue
18
coronary artery
18
heart right ventricle
18
substantia nigra
18
thyroid gland
18
transverse colon
17
gastrocnemius medialis
17
muscle of trunk
17
pancreas
17
retina
17
testis
16
chorionic villus
16
layer of hippocampus
16
omental fat pad
16
right atrium auricular region
16
skeletal muscle tissue
16
tibial artery
ascending aorta
15
cerebellum
15
endocrine pancreas
15
upper lobe of left lung
14
frontal cortex
14
temporal lobe
13
Peyer's patch
13
aorta
13
prostate gland
13
putamen
11
left cardiac atrium
11
left renal cortex interstitium
11
left renal pelvis
11
right renal pelvis
10
Ammon's horn
10
angular gyrus
10
breast epithelium
10
colonic mucosa
10
esophagus
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
lower leg skin
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
10
vagina
9
chorion membrane
9
cingulate gyrus
9
duodenal mucosa
9
mucosa of rectum
9
parathyroid adenoma
9
right lobe of liver
9
stomach smooth muscle
8
eye
8
muscle layer of colon
8
muscle layer of duodenum
8
right cardiac atrium
8
tongue
8
uterus
7
amygdala
7
gastroesophageal sphincter
7
hypothalamus
7
limb
7
nucleus accumbens
7
urinary bladder
6
Brodmann (1909) area 46
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
globus pallidus
6
midbrain
6
occipital lobe
6
skin of body
6
subcutaneous abdominal adipose tissue
5
C1 segment of cervical spinal cord
5
cartilage tissue
5
gastrocnemius medialis(Muscle - Skeletal)
5
germinal matrix
5
left ventricle myocardium
5
middle frontal gyrus
5
superior temporal gyrus
5
umbilical cord
4
amnion
4
bone tissue
4
cerebellar cortex
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
femur
4
medulla oblongata
4
mucosa of stomach
4
pons
4
rectum smooth muscle tissue
4
visceral abdominal adipose tissue
3
arm bone
3
cortex of kidney
3
dorsolateral prefrontal cortex
3
embryonic facial prominence
3
germinal center
3
inferior parietal cortex
3
leg bone
3
suprapubic skin
2
muscle of leg
2
blood
2
breast carcinoma
2
chorion
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
kidney epithelium
2
mammary gland
2
middle frontal area 46
2
minor salivary gland
2
pituitary gland
2
placental basal plate
2
prefrontal cortex
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
forelimb muscle
1
frontal pole
1
gastric (mucosa of stomach)
1
gyrus rectus
1
hindlimb muscle
1
intestinal epithelium
1
kidney - cortex
1
kidney - medulla
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
Organ
1
kidney
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
accessible chromatin
biosample_term_name!
ascending aorta
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR468ICH
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP