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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
66
muscle of arm
64
HeLa-S3
56
muscle of leg
54
muscle of back
19
psoas muscle
17
gastrocnemius medialis
17
muscle of trunk
16
skeletal muscle tissue
10
esophagus muscularis mucosa
9
stomach smooth muscle
8
uterus
7
gastroesophageal sphincter
7
skeletal muscle satellite cell
6
LHCN-M2
5
A673
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
myotube
5
skeletal muscle cell
4
SJCRH30
4
rectum smooth muscle tissue
4
skeletal muscle fiber
3
Ishikawa
3
type I muscle cell
3
type II muscle cell
2
muscle of leg
2
cardiac muscle myoblast
2
endometrium cancer
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
hindlimb muscle
1
aortic smooth muscle cell
1
cervix - ectocervix
1
endometrium
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
forelimb muscle
1
hindlimb muscle
1
rectal smooth muscle tissue
1
smooth muscle tissue
Organ
4
musculature of body
0
uterus
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
accessible chromatin
month_released!
November, 2021
Showing 4 of 4 results
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Download
FileSet
DSR213OLP
released
Annotation file set
: Candidate regulatory elements for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR359BQQ
released
Annotation file set
: Target gene predictions for BSS01549 SJCRH30 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR863JWS
released
Annotation file set
: Chromatin states for BSS01549 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR746IZY
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE SJCRH30
Lab:
AMP-T2D consortium
Project:
AMP