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Citing CMDGA
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Annotation type
3
gene expression
1
target gene predictions
Annotation Category
3
Gene expression levels
1
Target gene links
Annotation type Category
3
snDropSeq
1
HiC
Available data
3
tsv
3
txt
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
16
fibroblast of lung
15
foreskin fibroblast
13
fibroblast
12
fibroblast of dermis
12
osteoblast
12
pericyte cell
10
fibroblast of cardiac tissue
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
skin fibroblast
6
hepatic stellate cell
6
pancreatic stellate cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
fibroblast of the aortic adventitia
5
mesangial cell
5
mesenchymal stem cell
4
adult endothelial progenitor cell
4
cardiac fibroblast
4
fibroblast of gingiva
4
fibroblast of peridontal ligament
4
fibroblast of the conjunctiva
4
stromal cell of bone marrow
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
3
preadipocyte
2
cardiac fibroblast
2
adipocyte
2
articular chondrocyte
2
brain pericyte
2
columnar chondrocyte
2
fat cell
2
pulmonary interstitial fibroblast
1
activated pancreatic stellate cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
luteal cell
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
stromal cell
Organ
4
connective tissue
Life stage
3
adult
Date released
3
February, 2021
1
May, 2020
Software used
3
r
1
chicago
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
accessible chromatin
files.file_type!
bed gappedPeak
Showing 4 of 4 results
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Download
FileSet
DSR178POZ
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Epithelial Cells (unassigned) from GSE121862 snDropSeq kidney regions (medulla)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR947DNI
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Epithelial Cells (unassigned) from GSE121862 snDropSeq kidney regions (cortex)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR846HLK
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Epithelial Cells (unassigned) from GSE121862 snDropSeq kidney regions (cortex and medulla)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR284RGT
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of adult endothelial progenitor cell
Lab:
AMP-T2D consortium
Project:
AMP