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Schema
Citing CMDGA
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Annotation type
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
Annotation type Category
1
RNA-seq
Available data
1
tsv
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
110
monocyte
64
heart
62
HeLa-S3
61
stomach
56
A549
54
brain
51
H1-hESC
51
lung
49
muscle of arm
48
small intestine
47
adrenal gland
46
kidney
44
placenta
42
muscle of leg
40
common myeloid progenitor, CD34-positive
40
large intestine
39
CD8-positive, alpha-beta T cell
39
left lung
39
muscle of back
37
K562
36
liver
36
thymus
34
neural progenitor cell
33
right lung
31
hematopoietic multipotent progenitor cell
31
right kidney
29
B cell
29
islet of Langerhans
28
renal cortex interstitium
28
renal pelvis
27
CD14-positive monocyte
27
CD4-positive, alpha-beta memory T cell
27
left kidney
25
adipose tissue
24
heart left ventricle
24
spinal cord
23
hepatocyte
21
CD8-positive, alpha-beta memory T cell
21
spleen
20
body of pancreas
19
HFFc6
19
regulatory T cell
19
tibial nerve
18
endothelial cell
17
MCF-7
17
T-helper 1 cell
17
T-helper 17 cell
17
caudate nucleus
17
coronary artery
17
mononuclear cell
17
trophoblast cell
16
T cell
16
adipocyte
16
macrophage
16
psoas muscle
16
sigmoid colon
15
heart right ventricle
15
ovary
15
right atrium auricular region
14
frontal cortex
14
smooth muscle cell
14
thyroid gland
14
tibial artery
13
EndoC_BH1
13
T-helper 2 cell
13
cerebellum
13
endothelial cell of umbilical vein
13
fibroblast
13
fibroblast of lung
13
gastrocnemius medialis
13
neutrophil
13
subcutaneous adipose tissue
13
substantia nigra
12
GM12878
12
HepG2
12
ascending aorta
12
chorionic villus
12
endocrine pancreas
12
foreskin keratinocyte
12
mesenchymal stem cell
12
muscle of trunk
12
natural killer cell
12
omental fat pad
12
pancreatic ductal cell
12
transverse colon
11
aorta
11
fibroblast of dermis
11
mammary gland epithelial cell
11
pancreas
10
H9
10
endothelial cell of hepatic sinusoid
10
fibroblast of cardiac tissue
10
keratinocyte
10
retina
10
skeletal muscle tissue
10
testis
9
Ammon's horn
9
Peyer's patch
9
chorion membrane
9
endometrium adenocarcinoma
9
foreskin fibroblast
9
layer of hippocampus
9
left cardiac atrium
9
pancreatic delta cell
9
pericyte cell
9
putamen
9
skeletal muscle myoblast
8
angular gyrus
8
extended pluripotent stem (EPS) cells
8
immortal human breast epithelial cell line cell
8
lymphocyte
8
naive T cell
8
pancreatic acinar cell
8
pituitary stalk
8
progenitor cell of endocrine pancreas
8
temporal lobe
8
upper lobe of left lung
7
astrocyte
7
breast epithelium
7
cardiac muscle cell
7
cingulate gyrus
7
colonic mucosa
7
dendritic cell
7
duodenal mucosa
7
embryonic stem cell
7
epithelial cell of proximal tubule
7
esophagus
7
esophagus muscularis mucosa
7
pancreatic beta cell
7
thoracic aorta
6
22Rv1
6
Brodmann (1909) area 46
6
CD4-positive, alpha-beta T cell
6
LNCaP clone FGC
6
NAMALWA cell
6
T47D
6
alternatively activated macrophage
6
amygdala
6
anterior cingulate cortex
6
bronchial epithelial cell
6
cardiomyocytes (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
colon epithelial cell
6
dermis blood vessel endothelial cell
6
dermis lymphatic vessel endothelial cell
6
endodermal cell
6
epithelial cell of prostate
6
erythroblast
6
esophagus squamous epithelium
6
eye
6
fibroblast of breast
6
glomerular endothelial cell
6
hypothalamus
6
induced pluripotent stem cell
6
left renal cortex interstitium
6
left renal pelvis
6
lymphoblastoid cell line
6
mucosa of rectum
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neurosphere
6
pancreatic alpha cell
6
right lobe of liver
6
skeletal muscle satellite cell
6
trophoblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
GM19238
5
GM19239
5
GM19240
5
Glomerular Capillary Endothelial Cell
5
HCT116
5
IMR-90
Date released
1
February, 2024
Software used
1
r
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
accessible chromatin
disease_term_name!
neuroblastoma
month_released!
February, 2021
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR023OKO
released
Annotation file set
: Gene expression annotation of RNA-seq_iPSC-induced cortical excitatory neurons
Lab:
AMP-T2D consortium
Project:
AMP