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Schema
Citing CMDGA
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Annotation type
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
Annotation type Category
1
RNA-seq
Available data
1
tsv
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
110
monocyte
85
heart
82
stomach
71
kidney
69
brain
67
lung
66
muscle of arm
64
HeLa-S3
61
A549
61
small intestine
60
adrenal gland
58
placenta
56
muscle of leg
55
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
53
H1-hESC
52
left lung
47
thymus
46
CD8-positive, alpha-beta T cell
44
liver
44
right lung
42
hematopoietic multipotent progenitor cell
41
neural progenitor cell
41
right kidney
40
K562
39
B cell
39
renal cortex interstitium
38
renal pelvis
36
left kidney
35
islet of Langerhans
32
CD4-positive, alpha-beta memory T cell
32
spinal cord
31
CD14-positive monocyte
30
heart left ventricle
30
spleen
28
adipose tissue
25
MCF-7
24
body of pancreas
22
CD8-positive, alpha-beta memory T cell
22
adipocyte
22
sigmoid colon
22
trophoblast cell
21
natural killer cell
21
regulatory T cell
21
tibial nerve
20
breast cancer cell
20
mononuclear cell
19
HFFc6
19
T-helper 1 cell
19
caudate nucleus
19
psoas muscle
18
T-helper 17 cell
18
foreskin fibroblast
18
ovary
17
coronary artery
17
fibroblast
17
heart right ventricle
17
muscle of trunk
17
retina
17
smooth muscle cell
17
subcutaneous adipose tissue
16
H9
16
chorionic villus
16
fibroblast of lung
16
gastrocnemius medialis
16
induced pluripotent stem cell
16
mesenchymal stem cell
16
omental fat pad
16
skeletal muscle tissue
16
thyroid gland
16
transverse colon
15
GM12878
15
layer of hippocampus
15
pancreas
15
right atrium auricular region
15
substantia nigra
15
testis
15
tibial artery
15
upper lobe of left lung
14
CD4-positive, alpha-beta T cell
14
HepG2
14
T cell
14
ascending aorta
14
cardiac muscle cell
14
cerebellum
14
endocrine pancreas
14
macrophage
14
neutrophil
14
skeletal muscle myoblast
13
T-helper 2 cell
13
aorta
13
fibroblast of cardiac tissue
13
neurosphere
13
temporal lobe
12
Peyer's patch
12
fibroblast of dermis
12
neuroblastoma cell
11
frontal cortex
11
neuronal stem cell
11
osteoblast
11
pericyte cell
11
prostate gland
10
22Rv1
10
Ammon's horn
10
embryonic stem cell
10
gastric cancer cell
10
left cardiac atrium
10
left renal cortex interstitium
10
lymphocyte
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
progenitor cell of endocrine pancreas
10
putamen
10
right renal cortex interstitium
9
Rhabdomyosarcoma
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
left renal pelvis
9
liposarcoma
9
parathyroid adenoma
9
right renal pelvis
9
thoracic aorta
9
trophoblast
8
B-lymphoblastoid cell line
8
HEK293
8
IMR-90
8
cingulate gyrus
8
duodenal mucosa
8
endodermal cell
8
esophagus
8
fibroblast cell line
8
hepatic stellate cell
8
immortal human breast epithelial cell line cell
8
lower leg skin
8
naive T cell
8
pituitary stalk
8
skeletal muscle satellite cell
8
tongue
8
vagina
7
GM06990
7
GM12864
7
GM12865
7
GM12875
7
GM19238
7
GM19239
7
GM19240
7
HT-29
7
NAMALWA cell
7
SK-N-DZ
7
SK-N-MC
7
T47D
7
angular gyrus
7
astrocyte
7
cardiomyocytes (cardiac muscle cell)
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
foreskin melanocyte
7
limb
7
mast cell
7
mature neutrophil
7
mesendoderm
7
right lobe of liver
7
stomach smooth muscle
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Brodmann (1909) area 46
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM08714
6
GM12891
6
GM12892
6
GM23248
6
HAP-1
6
HCT116
6
HL-60
6
KARPAS-422 cell
6
WERI-Rb-1
6
WI38
6
amygdala
6
cardiac precursors (cardiac muscle cell)
6
chorion membrane
6
esophagus muscularis mucosa
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
hESC cell
6
hypothalamus
6
mesodermal cell
6
mucosa of rectum
Date released
1
February, 2024
Software used
1
r
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
accessible chromatin
month_released!
January, 2022
organ_slims!
epithelium
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR023OKO
released
Annotation file set
: Gene expression annotation of RNA-seq_iPSC-induced cortical excitatory neurons
Lab:
AMP-T2D consortium
Project:
AMP