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Schema
Citing CMDGA
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Annotation type
3
gene expression
Annotation Category
3
Gene expression levels
Annotation type Category
3
snDropSeq
Available data
3
tsv
3
txt
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
112
monocyte
54
common myeloid progenitor, CD34-positive
46
CD8-positive, alpha-beta T cell
42
B cell
32
CD4-positive, alpha-beta memory T cell
32
endothelial cell
31
CD14-positive monocyte
28
hepatocyte
26
natural killer cell
24
macrophage
23
regulatory T cell
22
CD8-positive, alpha-beta memory T cell
22
epithelial cell of proximal tubule
21
fibroblast
20
T-helper 1 cell
20
mononuclear cell
19
T-helper 17 cell
19
foreskin keratinocyte
19
glomerular endothelial cell
18
endothelial cell of umbilical vein
17
pericyte cell
17
trophoblast cell
16
T cell
16
fibroblast of lung
15
T-helper 2 cell
15
foreskin fibroblast
15
keratinocyte
15
neutrophil
15
smooth muscle cell
14
CD4-positive, alpha-beta T cell
14
skeletal muscle myoblast
13
mast cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
neurosphere
13
pancreatic ductal cell
12
fibroblast of dermis
12
mammary epithelial cell
12
mammary gland epithelial cell
12
osteoblast
11
bronchial epithelial cell
11
pancreatic delta cell
10
dermis blood vessel endothelial cell
10
endothelial cell of hepatic sinusoid
10
fibroblast of cardiac tissue
10
pancreatic acinar cell
10
pancreatic alpha cell
10
pancreatic beta cell
9
astrocyte
9
endothelial cell of lymphatic vessel
9
epithelial cell of prostate
9
glomerular visceral epithelial cell
9
hepatic stellate cell
9
mature neutrophil
9
naive T cell
8
fibroblast of breast
8
kidney tubule cell
8
myoepithelial cell of mammary gland
8
skeletal muscle satellite cell
7
adipocyte
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
kidney loop of Henle thin ascending limb epithelial cell
7
neuronal stem cell
7
retinal pigment epithelial cell
7
skin fibroblast
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
alternatively activated macrophage
6
cardiac muscle cell
6
choroid plexus epithelial cell
6
dermis lymphatic vessel endothelial cell
6
endocardial cell
6
epithelial cell of esophagus
6
erythroblast
6
foreskin melanocyte
6
kidney epithelial cell
6
kidney glomerular epithelial cell
6
kidney interstitial cell
6
myofibroblast cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
pancreatic stellate cell
6
peripheral blood mononuclear cell
6
pulmonary artery endothelial cell
6
renal cortical epithelial cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
fibroblast of the aortic adventitia
5
inflammatory macrophage
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
luminal epithelial cell of mammary gland
5
lung microvascular endothelial cell
5
memory B cell
5
mesangial cell
5
mesenchymal stem cell
5
regular ventricular cardiac myocyte
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
4
CD4-positive helper T cell
4
adult endothelial progenitor cell
4
astrocyte of the spinal cord
4
brain microvascular endothelial cell
4
cardiac fibroblast
4
cholangiocyte
4
fibroblast of gingiva
4
fibroblast of peridontal ligament
4
fibroblast of the conjunctiva
4
gamma-delta T cell
4
iris pigment epithelial cell
4
kidney capillary endothelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
nephron progenitor
4
non-pigmented ciliary epithelial cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic polypeptide-secreting cell
4
plasma cell
4
skeletal muscle fiber
4
stromal cell of bone marrow
4
tracheal epithelial cell
4
type I muscle cell
4
type II muscle cell
4
vascular associated smooth muscle cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
Schwann cell
3
T follicular helper cell
3
activated CD4-positive, alpha-beta T cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
aortic adventitial fibroblast
3
basal cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
colon epithelial cell
Organ
3
kidney
Life stage
3
adult
Date released
3
February, 2021
Software used
3
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
accessible chromatin
biosample_term_name!
Renin-positive Juxtaglomerular Granular Cell
files.file_type!
bed gappedPeak
Showing 3 of 3 results
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Download
FileSet
DSR197UPN
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Immune Cells - Macrophages from GSE121862 snDropSeq kidney regions (medulla)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR520LBU
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Immune Cells - Macrophages from GSE121862 snDropSeq kidney regions (cortex)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR897TVQ
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of kidney Immune Cells - Macrophages from GSE121862 snDropSeq kidney regions (cortex and medulla)
Lab:
AMP-T2D consortium
Project:
AMP