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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
binding sites
1
chromatin state
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
31
adipose tissue
28
fibroblast
25
adipocyte
22
pericyte cell
21
subcutaneous adipose tissue
19
thyroid gland
18
omental fat pad
17
mesenchymal stem cell
14
fibroblast of cardiac tissue
14
fibroblast of lung
13
foreskin fibroblast
12
osteoblast
11
fibroblast of dermis
10
pancreatic stellate cell
10
skin fibroblast
8
hepatic stellate cell
7
mesangial cell
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
GM23248
5
Mesangial Cell
5
chondrocyte
5
fibroblast of mammary gland
5
fibroblast of peridontal ligament
5
fibroblast of pulmonary artery
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
5
fibroblast of villous mesenchyme
4
HT1080
4
adult endothelial progenitor cell
4
bone tissue
4
brain pericyte
4
cardiac fibroblast
4
cartilage tissue
4
fibroblast of gingiva
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
3
thyroid follicular cell
2
articular chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
preadipocyte
1
pulmonary interstitial fibroblast
1
quiescent pancreatic stellate cell
1
thyroid
1
white adipose cell
1
white adipose tissue
Organ
5
connective tissue
5
limb
5
skin of body
0
thyroid gland
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
binding sites
histone modifications
Showing 5 of 5 results
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Download
FileSet
DSR449IDP
released
Annotation file set
: Candidate regulatory elements for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR448QKS
released
Annotation file set
: Target gene predictions for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR689DCS
released
Annotation file set
: Chromatin states for BSS00476 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR229GNK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM23248
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR757SGA
released
Annotation file set
: Accessible chromatin annotation for Epidermis Dermal fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP