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Schema
Citing CMDGA
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Annotation type
binding sites
1
accessible chromatin
histone modifications
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
63
HeLa-S3
59
A549
50
H1-hESC
38
K562
21
EndoC_BH1
21
MCF-7
19
HFFc6
16
H9
13
GM12878
10
pituitary stalk
9
HepG2
9
SK-N-DZ
9
SK-N-SH
9
endometrium adenocarcinoma
9
immortal human breast epithelial cell line cell
9
lymphocyte
8
22Rv1
8
induced pluripotent stem cell
7
LNCaP clone FGC
7
NAMALWA cell
7
T47D
7
WI38
7
lymphoblastoid cell line
6
HAP-1
6
HCT116
6
HEK293
6
HT-29
6
IMR-90
6
KARPAS-422 cell
6
MM.1S
6
OCI-LY7
6
PC-9
6
iPSC derived cell line
5
A172
5
A673
5
ACHN
5
CMK
5
Caki2
5
Daoy
5
GM04503
5
GM04504
5
GM06990
5
GM10248
5
GM10266
5
GM12864
5
GM12865
5
GM18507
5
GM19240
5
GM23248
5
H4
5
H7-hESC
5
HL-60
5
HUES6
5
HUES8
5
KBM-7
5
L1-S8
5
LHCN-M2
5
LoVo cell
5
M059J
5
MG63
5
PC-3
5
Panc1
5
RCC 7860
5
RPMI7951
5
RPMI8226
5
RWPE1
5
SJCRH30
5
SJSA1
5
SK-N-MC
5
SW480
5
WERI-Rb-1
5
iPS DF 19.11
4
ACC112
4
AG04449 cell
4
AG04450 cell
4
AG08396 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
BE(2)-C
4
BJ cell
4
C4-2B
4
Caco-2 cell
4
CyT49
4
DND-41
4
DOHH2
4
EH
4
EL
4
ELF-1
4
ELR
4
G401
4
GM03348
4
GM08714
4
GM12875
4
GM19238
4
GM19239
4
GM23338
4
H54
4
HS-27A
4
HS-5
4
HT1080
4
HUES48
4
HUES64
4
HuH-7
4
KMS-11
4
KOPT-K1
4
L1-S8R
4
LNCAP
4
Loucy
4
NB4
4
NCI-H226 cell
4
NCI-H929
4
NT2-D1 cell
4
OCI-LY1
4
OCI-LY3
4
RWPE2
4
SK-MEL-5
4
SU-DHL-6
4
UCSF-4
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
3
8988T
3
AG08395 cell
3
AG20443
3
COLO829
3
CWRU1
3
ES-I3
3
GM12891
3
GM12892
3
HEK293T
3
HK-2 cell
3
HPDE6-E6E7
3
HTR-8/Svneo
3
HuH-7.5
3
Jurkat
3
MCF 10A
3
NCI-H460 cell
3
U937
3
VCaP cell
3
colon carcinoma
3
colon epithelial cell
3
foreskin fibroblast
3
iPS DF 4.7 Cell Line
3
iPS-NIHi11
3
iPS-NIHi7
3
medulloblastoma
3
renal cell carcinoma
3
urothelium cell line
2
AG10803
2
BJAB cell
2
DG-75 cell
2
ESC derived cell line
2
GM13976
2
GM13977
2
GM20000
2
HCT-116 cell
2
MCF 10A cell
2
MDA-MB-231 cell
2
MIN6
2
NAMALWA
2
NCCIT cell
2
RKO
2
Rh-4 cell
2
SUDHL5
2
THP-1
2
U-266 cell
2
Z-138
2
fibroblast cell line
2
fibroblast of cardiac tissue
2
glomerular visceral epithelial cell
2
macrophage
2
muscle
2
smooth muscle cell of the coronary artery
1
786-O cell
1
A-673 cell
1
AG04449
1
AG04450
1
AG09309
1
AG09319
1
B-lymphoblastoid cell line
1
BE2C
1
BJ
1
BL-2 cell
1
COLO-829 cell
1
COLO205
1
Caco-2
1
D341 Med cell
1
D721Med
1
ECC-1
1
G-401 cell
1
GM12801
1
GM12873
1
GM12874
1
GM18486
1
GM18505
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
binding sites
histone modifications
organ_slims!
tongue
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR586ZCU
released
Annotation file set
: Accessible chromatin annotation for Breast T-47D from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP