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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
binding sites
1
accessible chromatin
1
candidate regulatory elements
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
5
hg19
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
66
stomach
65
heart
55
kidney
51
brain
51
lung
50
muscle of arm
49
CD8-positive, alpha-beta T cell
47
adrenal gland
47
small intestine
44
placenta
43
large intestine
42
A549
42
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
38
liver
36
thymus
35
islet of Langerhans
34
retina
34
right lung
33
B cell
32
hematopoietic multipotent progenitor cell
31
right kidney
30
monocyte
30
renal cortex interstitium
30
renal pelvis
27
CD14-positive monocyte
27
left kidney
25
spinal cord
24
spleen
23
CD4-positive, alpha-beta memory T cell
23
adipose tissue
22
adipocyte
22
regulatory T cell
21
EndoC_BH1
21
heart left ventricle
20
endothelial cell
20
epithelial cell of proximal tubule
20
neural progenitor cell
20
pigmented layer of retina
19
glomerular endothelial cell
19
natural killer cell
18
MCF-7
18
T-helper 1 cell
18
hepatocyte
17
K562
17
T-helper 17 cell
17
foreskin keratinocyte
17
pancreatic ductal cell
17
sigmoid colon
17
trophoblast cell
16
induced pluripotent stem cell
16
ovary
15
CD8-positive, alpha-beta memory T cell
15
body of pancreas
15
psoas muscle
14
H1-hESC
14
embryonic stem cell
14
gastrocnemius medialis
14
mesenchymal stem cell
14
pancreatic alpha cell
14
tibial nerve
14
transverse colon
13
CD4-positive, alpha-beta T cell
13
endothelial cell of umbilical vein
13
foreskin fibroblast
13
heart right ventricle
13
mononuclear cell
13
pancreas
13
pancreatic beta cell
13
pancreatic delta cell
13
skeletal muscle tissue
13
subcutaneous adipose tissue
13
thyroid gland
12
T cell
12
T-helper 2 cell
12
muscle of trunk
12
neutrophil
12
skeletal muscle myoblast
12
testis
11
breast cancer cell
11
caudate nucleus
11
chorionic villus
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
upper lobe of left lung
10
Peyer's patch
10
endocrine pancreas
10
fibroblast of lung
10
layer of hippocampus
10
macrophage
10
pancreatic acinar cell
10
smooth muscle cell
9
H9
9
HeLa-S3
9
cardiac muscle cell
9
cardiomyocytes
9
fibroblast of cardiac tissue
9
glomerular visceral epithelial cell
9
keratinocyte
9
neurosphere
9
progenitor cell of endocrine pancreas
9
retinal pigment epithelial cell
8
HepG2
8
Rhabdomyosarcoma
8
aorta
8
breast epithelium
8
coronary artery
8
gastric cancer cell
8
left renal cortex interstitium
8
mammary epithelial cell
8
mammary gland epithelial cell
8
omental fat pad
8
osteoblast
8
pituitary stalk
8
right atrium auricular region
8
right renal pelvis
8
temporal lobe
7
22Rv1
7
B-lymphoblastoid cell line
7
GM12878
7
bronchial epithelial cell
7
cardiomyocytes (cardiac muscle cell)
7
colonic mucosa
7
epithelial cell of prostate
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
fibroblast of dermis
7
left renal pelvis
7
lower leg skin
7
neuroblastoma cell
7
prostate gland
7
substantia nigra
7
tibial artery
7
trophoblast
6
Ammon's horn
6
Chondroid Chordoma
6
HAP-1
6
HEK293
6
HT-29
6
IMR-90
6
KARPAS-422 cell
6
cardiac precursors (cardiac muscle cell)
6
cerebellum
6
cingulate gyrus
6
diffuse intrinsic pontine glioma
6
endometrium adenocarcinoma
6
esophagus
6
eye
6
immortal human breast epithelial cell line cell
6
mature neutrophil
6
mesendoderm
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuronal stem cell
6
occipital lobe
6
pancreatic stellate cell
6
parathyroid adenoma
6
right renal cortex interstitium
6
skeletal muscle satellite cell
6
thoracic aorta
6
tongue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD1c-positive myeloid dendritic cell
5
CMK
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
GM06990
5
GM12864
5
GM12865
5
GM23248
5
Glomerular Capillary Endothelial Cell
5
H7-hESC
Life stage
2
newborn
Date released
2
September, 2022
1
February, 2021
1
June, 2020
Software used
2
macs
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
binding sites
assembly!
GRCh38
biosample_term_name!
SK-N-MC
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR006UKO
released
Annotation file set
: Candidate regulatory elements for BSS00113 BJ cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR190OGJ
released
Annotation file set
: Target gene predictions for BSS00113 BJ cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR136ILX
released
Annotation file set
: Histone modifications annotation for Epidermis BJ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR920BGR
released
Annotation file set
: Accessible chromatin annotation for Epidermis BJ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP