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Annotation type
2
eQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
RNA-seq
File set status
2
released
Genome assembly (visualization)
2
hg18
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
1
omental fat pad
1
subcutaneous adipose tissue
Organ
2
adipose tissue
2
connective tissue
1
liver
Life stage
2
adult
Date released
2
August, 2021
Software used
135
r
110
macs
48
chromhmm
39
encode-ccres
31
abc
16
deltasvm
9
qTLtools
8
deseq2
5
fastqtl
4
chicago
4
peer
2
deeptools
2
gtex_eqtl:V8
2
gtex_finemapping_eQTL:caveman
2
gtex_finemapping_eQTL:caviar
2
gtex_finemapping_eQTL:dapg
2
mach2qtl
2
nospecificsoft_customcode
2
rasqual
2
samtools
2
umitools
1
cicero
1
eigenmt
1
emmax
1
epacts
1
fast-lmm
1
matrix-eQTL
1
probabel
1
seurat
1
unknown
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
binding sites
biosample_term_name!
fibroblast of skin of abdomen
Showing 2 of 2 results
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FileSet
DSR397GGI
released
Annotation file set
: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR767ENC
released
Annotation file set
: eQTLS in different tissues: omental fat (741 samples)
Lab:
AMP-T2D consortium
Project:
AMP