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Schema
Citing CMDGA
Clear Filters
Annotation type
binding sites
1
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
63
HeLa-S3
60
A549
51
H1-hESC
39
K562
23
MCF-7
22
EndoC_BH1
19
HFFc6
16
H9
14
GM12878
14
HepG2
11
breast cancer cell
10
lymphoblastoid cell line
10
lymphocyte
9
22Rv1
9
Rhabdomyosarcoma
9
endometrium adenocarcinoma
9
gastric cancer cell
9
immortal human breast epithelial cell line cell
8
NAMALWA cell
8
induced pluripotent stem cell
8
neuroblastoma cell
7
B-lymphoblastoid cell line
7
HAP-1
7
HEK293
7
HT-29
7
IMR-90
7
KARPAS-422 cell
7
LNCaP clone FGC
7
MM.1S
7
OCI-LY7
7
PC-9
7
T47D
7
WI38
6
CMK
6
GM06990
6
GM12864
6
GM12865
6
GM18507
6
GM19240
6
GM23248
6
H7-hESC
6
HCT116
6
HL-60
6
LHCN-M2
6
LoVo cell
6
MG63
6
PC-3
6
RPMI8226
6
RWPE1
6
SW480
6
WERI-Rb-1
6
diffuse intrinsic pontine glioma
6
iPSC derived cell line
6
liposarcoma
6
squamous cell lung carcinoma
5
A673
5
ACHN
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
BJ cell
5
Caco-2 cell
5
Caki2
5
Chondroid Chordoma
5
CyT49
5
GM04503
5
GM04504
5
GM10248
5
GM10266
5
GM12875
5
GM19238
5
GM19239
5
H4
5
HUES6
5
HUES8
5
HuH-7
5
Jurkat
5
KBM-7
5
L1-S8
5
LNCAP
5
NT2-D1 cell
5
OCI-LY1
5
Panc1
5
RCC 7860
5
RPMI7951
5
SJCRH30
5
SJSA1
5
SK-MEL-5
5
esophageal adenocarcinoma
5
hESC cell
5
iPS DF 19.11
5
melanoma cell
4
ACC112
4
AG08396 cell
4
C4-2B
4
DND-41
4
DOHH2
4
EH
4
EL
4
ELF-1
4
ELR
4
G401
4
GM03348
4
GM08714
4
GM12891
4
GM12892
4
GM23338
4
HK-2 cell
4
HS-27A
4
HS-5
4
HT1080
4
HUES48
4
HUES64
4
KMS-11
4
KOPT-K1
4
L1-S8R
4
Loucy
4
NB4
4
NCI-H226 cell
4
NCI-H929
4
OCI-LY3
4
RWPE2
4
Rh-4 cell
4
SU-DHL-6
4
U937
4
UCSF-4
4
VCaP cell
4
fibroblast of cardiac tissue
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
4
osteosarcoma
4
renal cell carcinoma
4
urothelium cell line
3
8988T
3
AG08395 cell
3
AG20443
3
COLO205
3
COLO829
3
CWRU1
3
ES-I3
3
Ewing sarcoma
3
HCT-116 cell
3
HEK293T
3
HPDE6-E6E7
3
HTR-8/Svneo
3
HuH-7.5
3
MCF 10A
3
MDA-MB-231 cell
3
NCCIT cell
3
NCI-H460 cell
3
RKO
3
RS4-11 cell
3
U-266 cell
3
Z-138
3
acute myeloid leukemia
3
colon carcinoma
3
colon epithelial cell
3
esophageal squamous cell carcinoma
3
fibroblast cell line
3
foreskin fibroblast
3
glioblastoma cell
3
glioma cell
3
iPS DF 4.7 Cell Line
3
iPS-NIHi11
3
iPS-NIHi7
3
lymphoblast
3
macrophage
3
smooth muscle cell of the coronary artery
2
786-O cell
2
A-673 cell
2
AG10803
2
BJAB cell
2
D341 Med cell
2
DG-75 cell
2
ESC derived cell line
2
G-401 cell
2
GM12873
2
GM13976
2
GM13977
2
GM18505
2
GM19099
2
GM19193
2
GM20000
2
HAC cell
2
HBMEC cell
2
HS-SY-2 cell
2
HeLa cell
2
JVM-2 cell
2
Kasumi-1
2
MCF 10A cell
2
MCF10A-Er-Src cell
2
MIN6
2
MOLM-13 cell
Organ
4
blood
4
bodily fluid
Life stage
3
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
binding sites
organ_slims!
brain
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR618KAV
released
Annotation file set
: Candidate regulatory elements for BSS00452 GM12891 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR929DTX
released
Annotation file set
: Target gene predictions for BSS00452 GM12891 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR222GWM
released
Annotation file set
: Chromatin states for BSS00452 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR248ZTU
released
Annotation file set
: Histone modifications annotation for Blood GM12891 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP