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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
binding sites
1
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
48
liver
37
hepatocyte
14
HepG2
11
hepatic stellate cell
10
endothelial cell of hepatic sinusoid
9
right lobe of liver
6
MG63
5
HuH-7
5
L1-S8
5
OCI-LY1
5
SJSA1
4
HS-27A
4
HS-5
4
KMS-11
4
L1-S8R
4
NCI-H929
4
OCI-LY3
4
bone tissue
4
femur
4
megakaryocyte
4
pancreatic endothelial cell
4
stromal cell of bone marrow
3
HuH-7.5
3
arm bone
3
hepatocyte(AFP)
3
leg bone
2
U2OS
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
Liver fetal (hepatocyte)
1
bone cell
1
bone marrow cell
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
mononuclear cell of bone marrow
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
Disease term
3
hepatocellular carcinoma
Organ
5
liver
0
bone element
Life stage
3
adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
macs
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
binding sites
organ_slims!
intestine
Showing 5 of 5 results
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Download
FileSet
DSR203ONK
released
Annotation file set
: Candidate regulatory elements for BSS00718 HuH-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR628THR
released
Annotation file set
: Target gene predictions for BSS00718 HuH-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR425WPB
released
Annotation file set
: Chromatin states for BSS00718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR538IZE
released
Annotation file set
: Histone modifications annotation for Liver HuH-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR949OAS
released
Annotation file set
: Accessible chromatin annotation for Liver HuH-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP