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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
binding sites
2
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
cell line
1
tissue
Biosample term
104
monocyte
33
CD8-positive, alpha-beta T cell
26
neural progenitor cell
24
retina
20
pigmented layer of retina
18
fibroblast
17
endothelial cell
13
excitatory neuron
13
macrophage
12
hepatocyte
12
kidney
11
breast cancer cell
10
pancreatic ductal cell
10
retinal pigment epithelial cell
9
EndoC_BH1
9
Rhabdomyosarcoma
9
astrocyte
9
gastric cancer cell
9
pericyte cell
9
smooth muscle cell
8
embryonic stem cell
8
neuroblastoma cell
8
pancreatic acinar cell
8
pancreatic beta cell
7
B cell
7
HepG2
7
T cell
7
adipocyte
7
diffuse intrinsic pontine glioma
7
esophageal adenocarcinoma
7
osteoblast
7
pancreatic alpha cell
6
B-lymphoblastoid cell line
6
Chondroid Chordoma
6
SGBS preadipocytes
6
chondrocyte
6
endothelial cell of hepatic sinusoid
6
fibroblast of cardiac tissue
6
glutamatergic neuron
6
hESC cell
6
heart
6
islet of Langerhans
6
liposarcoma
6
liver
6
neuroblastoma cell line
6
pancreas
6
squamous cell lung carcinoma
5
T-cell acute lymphoblastic leukemia
5
brain
5
erythroblast
5
hepatic stellate cell
5
inhibitory neuron
5
keratinocyte
5
melanoma cell
5
osteosarcoma
5
pancreatic delta cell
5
skeletal muscle fiber
5
skeletal muscle satellite cell
4
Rh-4 cell
4
acute myeloid leukemia
4
acute myeloid leukemia cell
4
cardiac muscle cell
4
heart left ventricle
4
lymphoblastoid cell line
4
mammary epithelial cell
4
mesenchymal stem cell
4
natural killer cell
4
neuronal stem cell
4
pancreatic stellate cell
4
regulatory T cell
4
rhabdomyosarcoma cell
4
skin fibroblast
4
stomach
3
cardiac fibroblast
3
B-lymphocyte
3
COLO205
3
Ewing sarcoma
3
Jurkat
3
MCF-7
3
RS4-11 cell
3
Th1 cell
3
adipose-derived stem cell
3
aortic endothelial cell
3
bone marrow cell
3
bronchial epithelial cell
3
caudate nucleus
3
choroid plexus epithelial cell
3
colon epithelial cell
3
coronary artery
3
cortical cell of adrenal gland
3
diffuse large B-cell lymphoma
3
enterocyte
3
erythroid cell
3
esophageal squamous cell carcinoma
3
foreskin fibroblast
3
gabaergic neuron
3
glial cell
3
glioblastoma cell
3
glioma cell
3
globus pallidus
3
glomerular visceral epithelial cell
3
lymphoblast
3
mammary gland epithelial cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
occipital lobe
3
pancreatic ductal adenocarcinoma
3
placenta
3
preadipocyte
3
prostate gland
3
putamen
3
right atrium auricular region
3
spinal cord
3
superior temporal gyrus
3
tibial artery
3
tibial nerve
3
tracheal epithelial cell
3
type I muscle cell
3
type II muscle cell
3
type II pneumocyte
2
786-O cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
BE(2)-C
2
BJ cell
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
Caco-2 cell
2
D341 Med cell
2
G-401 cell
2
GM06990
2
GM12864
2
GM12865
2
GM12878
2
GM18507
2
GM19240
2
GM23248
2
H1-hESC
2
H7-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCT-116 cell
2
HEK293
2
HL-60
2
HS-SY-2 cell
2
HT-29
2
HeLa cell
2
HuH-7
2
IMR-90
2
Ishikawa
2
K562
2
KARPAS-422 cell
2
Kasumi-1
2
LHCN-M2
2
LNCAP
2
LoVo cell
2
MCF10A-Er-Src cell
2
MDA-MB-231 cell
2
MG63
2
MM.1S
2
MOLM-13 cell
2
Mantle cell lymphoma
2
Muller cell
2
Myoblasts
2
NAMALWA cell
2
NB-4 cell
2
NCCIT cell
2
NHBE cell
2
NHDF cell
2
NHEK
2
NT2-D1 cell
2
Normal Human Astrocytes
2
OCI-AML3
2
OCI-LY7
2
PA-TU-8988T cell
2
PANC-1 cell
2
PC-3
2
PC-9
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
REH cell
2
RKO
2
RPMI8226
2
RWPE1
2
Rh-5 cell
2
SAEC
2
SK-N-DZ
2
SK-N-MC
2
SK-N-SH_RA
2
SKMC
2
SW480
2
Saos-2 cell
2
T-47D cell
2
Th17 cell
Organ
2
blood
2
bodily fluid
2
bone element
1
esophagus
1
musculature of body
Date released
3
June, 2020
2
February, 2021
Software used
18
r
10
chromhmm
5
encode-ccres
5
macs
1
abc
1
qTLtools
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
binding sites
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR685YUE
released
Annotation file set
: Histone modifications annotation for Bone MG-63 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855GPE
released
Annotation file set
: Histone modifications annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR789NPM
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Esophagus muscularis mucosa from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR791ADX
released
Annotation file set
: Accessible chromatin annotation for Bone MG-63 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP