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Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
44
H1-hESC
39
K562
23
trophoblast cell
16
H9
16
chorionic villus
14
GM12878
10
trophoblast
9
endodermal cell
7
HAP-1
7
NAMALWA cell
7
OCI-LY7
7
mesodermal cell
6
CMK
6
GM06990
6
GM19240
6
H7-hESC
6
HL-60
6
RPMI8226
5
CyT49
5
GM12875
5
GM19238
5
GM19239
5
H4
5
HUES6
5
HUES8
5
KBM-7
5
peripheral blood mononuclear cell
4
ELF-1
4
GM12891
4
GM12892
4
HUES48
4
HUES64
4
NB4
4
UCSF-4
4
ectodermal cell
4
embryonic facial prominence
3
ES-I3
3
cardiac mesoderm primordium
2
GM12873
2
GM18505
2
GM19099
2
GM19193
2
NAMALWA
2
blood
2
hESC H9
2
peripheral blood stem cell
1
GM10847
1
GM12872
1
GM12874
1
GM18526
1
GM18951
1
H1
1
H7
1
Karpas-422
1
cardiogenic mesoderm
1
embryonic fibroblast
1
first pancreatic bud
1
morula
1
placental hematopoietic stem cell
1
primordial germ cell
1
trophoblast giant cell
Organ
1
embryo
1
extraembryonic component
1
placenta
0
blood
Date released
1
November, 2021
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
annotation_type!
binding sites
files.file_type!
tsv
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Download
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE