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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
79
ChIP-seq
60
DNase-seq
2
RNA-seq
1
ATAC-seq
1
HiC
1
scRNA-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
21
retina
20
pigmented layer of retina
10
neural progenitor cell
10
pituitary stalk
8
EndoC_BH1
7
adipocyte
7
kidney
6
dendritic cell
6
embryonic stem cell
6
retinal pigment epithelial cell
5
SGBS preadipocytes
5
chondrocyte
5
islet of Langerhans
4
liver
3
adipose tissue
3
coronary artery
2
BJAB cell
2
HepG2
2
Jurkat
2
MCF 10A cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
THP-1
2
U937
2
adipose-derived stem cell
2
adrenal gland
2
differentiating adipose-derived stem cell
2
pancreas
2
spleen
2
stomach
2
subcutaneous adipose tissue
1
A549
1
A673
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
SK-N-SH
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
cardiac muscle cell
1
cardiac precursors
1
cardiac ventricle
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
excitatory neuron
1
gastrocnemius medialis
1
heart
1
heart left ventricle
1
hippocampal neuron
1
iPS DF 19.11
1
induced pluripotent stem cell
1
large intestine
1
lower motor neuron
1
macrophage
1
mesenchymal stem cell
1
mesendoderm
1
monocyte
1
muscle of leg
1
muscle of trunk
1
myotube
1
neuron cell of Hypothalamus (neuron)
1
neuronal stem cell
1
omental fat pad
1
ovary
1
placenta
1
proximal epiphysis
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
psoas muscle
1
right atrium auricular region
1
sigmoid colon
1
skeletal muscle myoblast
1
small intestine
1
smooth muscle cell of the coronary artery
1
spinal cord
1
thoracic aorta
1
thymus
1
thyroid gland
1
tibial artery
1
tibial nerve
1
transverse colon
1
trophoblast cell
1
uterus
1
white adipose tissue
Organ
1
heart
Life stage
1
embryonic
Date released
1
November, 2019
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
caQTL
variant allelic effects
biosample_type!
primary cell
Showing 1 of 1 results
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Download
FileSet
DSR351NUN
released
Annotation file set
: Accessible chromatin annotation of heart
Lab:
AMP-T2D consortium
Project:
AMP