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Citing CMDGA
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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
31
adipose tissue
23
adipocyte
20
subcutaneous adipose tissue
18
omental fat pad
12
mesenchymal stem cell
7
GM23248
7
chondrocyte
6
subcutaneous abdominal adipose tissue
5
cartilage tissue
5
fibroblast of cardiac tissue
4
HT1080
4
bone tissue
3
fibroblast
3
foreskin fibroblast
3
skin fibroblast
3
visceral abdominal adipose tissue
2
adipose tissue derived mesenchymal stem cell
2
hepatic stellate cell
2
pancreatic stellate cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
brain pericyte
1
cardiac fibroblast
1
embryonic fibroblast
1
fibroblast of the conjunctiva
1
white adipose cell
1
white adipose tissue
Organ
1
connective tissue
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
caQTL
biosample_type!
primary cell
month_released!
January, 2022
Showing 1 of 1 results
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Download
FileSet
DSR125CCG
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP