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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
3
chromatin state
target gene predictions
1
accessible chromatin
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
2
ATAC-seq
Available data
3
bed bed9
2
bed bed3+
1
bigBed bed9
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
16
endothelial cell of hepatic sinusoid
15
coronary artery
14
tibial artery
10
ascending aorta
10
endothelial cell of umbilical vein
6
smooth muscle cell of the coronary artery
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
aorta
5
fibroblast of pulmonary artery
5
thoracic aorta
4
aortic endothelial cell
4
pancreatic endothelial cell
4
pulmonary artery endothelial cell
3
kidney capillary endothelial cell
2
brain microvascular endothelial cell
2
capillary endothelial cell
2
dermis blood vessel endothelial cell
2
endothelial cell of coronary artery
2
fibroblast of the aortic adventitia
2
vein endothelial cell
1
brain microvascular endothelial cell
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
circle of Willis
1
placental villus capillary endothelial cell
1
whole blood
Organ
11
blood
11
bodily fluid
5
blood vessel
5
vasculature
Life stage
3
adult
Date released
2
September, 2022
1
May, 2020
1
November, 2019
1
October, 2019
Software used
3
chromhmm
1
deltasvm
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
candidate regulatory elements
target gene predictions
Showing 5 of 5 results
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Download
FileSet
DSR971IKF
released
Annotation file set
: Chromatin states for BSS01815 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR118XVM
released
Annotation file set
: Chromatin states for BSS01814 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR727LWQ
released
Annotation file set
: Genetic variants with deltaSVM predictions in thoracic aorta ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR836QPQ
released
Annotation file set
: Accessible chromatin annotation of thoracic aorta
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR649MVO
released
Annotation file set
: ChromHMM 18-state model for Thoracic Aorta from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP