Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
ChIP-seq
15
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
25
hepatocyte
17
liver
10
endothelial cell of hepatic sinusoid
6
colon epithelial cell
6
enterocyte
5
hepatic stellate cell
5
right lobe of liver
4
HepG2
4
enteric smooth muscle cell
4
pancreatic endothelial cell
4
small intestine
3
hepatocyte(AFP)
3
sigmoid colon
3
transverse colon
2
HCT-116 cell
2
HCT116
2
HT-29
2
enterocyte of epithelium of small intestine
2
large intestine
2
paneth cell
2
small intestine goblet cell
1
HuH-7
1
Liver fetal (hepatocyte)
1
Peyer's patch
1
RKO
1
SW480
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
crypt of Lieberkuhn
1
small intestine - terminal Ileum
Organ
2
intestine
2
large intestine
0
liver
Date released
1
June, 2020
1
May, 2021
Software used
1
abc
1
macs
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
annotation_type!
candidate regulatory elements
annotation_type_category!
ChIP-seq
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR232GSH
released
Annotation file set
: enhancer-gene predicton of large_intestine_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR820BBL
released
Annotation file set
: Accessible chromatin annotation for Digestive tract Colon from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP