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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
3
chromatin state
3
target gene predictions
1
gene expression
Annotation Category
3
Target gene links
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
6
ChIP-seq
3
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
3
bed bed9
1
tsv
File set status
7
released
Genome assembly (visualization)
6
hg19
3
GRCh38
Organism
7
Homo sapiens
Biosample type
5
tissue
2
cell line
Biosample term
4
parathyroid adenoma
2
PC-3
1
kidney
Disease term
59
chronic kidney disease
57
acute kidney failure
55
Acute kidney failure, unspecified
55
Chronic kidney disease (CKD)
36
lung epithelial-myoepithelial carcinoma
20
age-related macular degeneration
16
Philadelphia-positive myelogenous leukemia
12
large-cell immunoblastic lymphoma
10
breast cancer
10
colorectal adenocarcinoma
10
neuroblastoma
8
prostate adenocarcinoma
6
acute lymphoblastic leukemia
6
cervical adenocarcinoma
6
endometrium adenocarcinoma
6
glioblastoma
6
hepatocellular carcinoma
6
parathyroid gland clear cell adenoma
5
coronary artery disease
4
Burkitt lymphoma
4
acute promyelocytic leukemia
4
anosmia
4
breast ductal adenocarcinoma
4
melanoma
4
osteosarcoma
4
plasma cell myeloma
4
renal cell adenocarcinoma
3
squamous cell carcinoma
2
Ewing sarcoma
2
adenoid cystic carcinoma
2
clear cell renal carcinoma
2
colon carcinoma
2
diabetes mellitus,hypertensive disorder
2
fibrosarcoma
2
glioma
2
hypertensive disorder
2
lung adenocarcinoma
2
lung large cell carcinoma
2
metastatic melanoma
2
pancreatic adenocarcinoma
2
pancreatic ductal adenocarcinoma
2
prostate cancer
2
prostate carcinoma
2
retinoblastoma
2
testicular embryonal carcinoma
1
chronic kidney disease, hypertensive disorder
1
colorectal cancer
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
heart failure
1
hypertensive disorder, chronic kidney disease
1
small cell lung carcinoma
1
type 2 diabetes mellitus
Organ
2
prostate gland
1
kidney
Life stage
6
adult
Date released
6
September, 2022
1
February, 2021
Software used
4
r
3
chromhmm
Lab
6
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
7
AMP
RFA
6
AMP
1
AMP2
annotation_type!
candidate regulatory elements
biosample_term_name!
chorion membrane
Showing 7 of 7 results
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Download
FileSet
DSR108LWF
released
Annotation file set
: Target gene predictions for BSS01414 PC-3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR149DOY
released
Annotation file set
: Target gene predictions for BSS01412 parathyroid adenoma from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR861HKP
released
Annotation file set
: Target gene predictions for BSS01411 parathyroid adenoma from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR205VRK
released
Annotation file set
: Chromatin states for BSS01414 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR585RAO
released
Annotation file set
: Chromatin states for BSS01412 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR737CBP
released
Annotation file set
: Chromatin states for BSS01411 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR464URP
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP