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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
variant allelic effects
Annotation Category
3
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
5
DNase-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
34
muscle of arm
31
muscle of leg
25
adipose tissue
19
subcutaneous adipose tissue
19
tibial nerve
18
coronary artery
16
endothelial cell of hepatic sinusoid
16
tibial artery
14
endothelial cell of umbilical vein
13
omental fat pad
12
ascending aorta
10
gastrocnemius medialis
9
aorta
8
choroid plexus epithelial cell
7
smooth muscle cell of the coronary artery
7
thoracic aorta
6
dermis lymphatic vessel endothelial cell
6
fibroblast of pulmonary artery
5
cardiac fibroblast
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Vascular Smooth Muscle Cell
5
GM23248
5
Glomerular Capillary Endothelial Cell
5
Lymphatic Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
gastrocnemius medialis(Muscle - Skeletal)
5
limb
5
pulmonary artery endothelial cell
4
aortic endothelial cell
4
dermis blood vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
kidney capillary endothelial cell
4
lower leg skin
4
pancreatic endothelial cell
4
smooth muscle cell of the brain vasculature
4
vascular associated smooth muscle cell
4
visceral abdominal adipose tissue
3
brain microvascular endothelial cell
3
fibroblast of the aortic adventitia
2
hindlimb muscle
2
muscle of leg
2
adipose tissue derived mesenchymal stem cell
2
arm bone
2
capillary endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endothelial cell of coronary artery
2
femur
2
leg bone
2
lung microvascular endothelial cell
2
skin of forearm
2
vein endothelial cell
1
brain microvascular endothelial cell
1
omental fat pad
1
abdominal aorta artery
1
adipose-derived mesenchymal stem cell
1
aorta wall
1
aortic smooth muscle cell
1
beige adipocyte
1
cardiac fibroblast
1
circle of Willis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
fibroblast of arm
1
forelimb muscle
1
mesenchymal stem cell of adipose
1
placental villus capillary endothelial cell
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - sun exposed (lower leg)
1
subcutaneous abdominal adipose tissue
1
white adipose cell
1
white adipose tissue
1
whole blood
Organ
5
brain
5
connective tissue
5
vasculature
0
adipose tissue
0
limb
Life stage
2
adult
1
fetal
1
unknown
Date released
3
January, 2020
2
May, 2020
Software used
3
macs
2
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
candidate regulatory elements
Showing 5 of 5 results
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Download
FileSet
DSR631MKV
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac fibroblast DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR529VUE
released
Annotation file set
: Genetic variants with deltaSVM predictions in heart cardiac fibroblast adult DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR353QAR
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast adult from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR663NVC
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast fetal from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR608VUV
released
Annotation file set
: Accessible chromatin annotation of heart cardiac fibroblast unknow from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP