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Schema
Citing CMDGA
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Annotation type
1
binding sites
candidate regulatory elements
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
12
tsv
txt
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
20
breast cancer cell
12
neuroblastoma cell
11
cardiomyocytes
11
gastric cancer cell
10
diffuse intrinsic pontine glioma
10
kidney
9
Rhabdomyosarcoma
9
induced pluripotent stem cell
9
islet of Langerhans
9
liposarcoma
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
neuroblastoma cell line
7
B-lymphoblastoid cell line
7
endothelial cell
7
fibroblast cell line
7
hESC cell
7
keratinocyte
7
melanoma
7
osteosarcoma
7
squamous cell lung carcinoma
6
Chondroid Chordoma
6
acute myeloid leukemia
6
glioblastoma multiforme cancer stem cell
6
mammary epithelial cell
6
neural progenitor cell
6
neuronal stem cell
6
osteoblast
6
prostate cancer cell line
5
Ewing sarcoma
5
diffuse large B-cell lymphoma
5
embryonic stem cell
5
esophageal squamous cell carcinoma
5
hepatocyte
5
lymphoblastoid cell line
5
melanoma cell
5
synovial sarcoma cell
5
triple-negative breast cancer
4
HS-SY-2 cell
4
Jurkat
4
MCF-7
4
Mantle cell lymphoma
4
RS4-11 cell
4
Rh-4 cell
4
Th1 cell
4
Tumor-derived cell line
4
adipose tissue
4
bone tissue
4
brain
4
bronchial epithelial cell
4
cardiac muscle cell
4
colon adenocarcinoma
4
dermal fibroblast
4
erythroid progenitor cell
4
foreskin fibroblast
4
glioblastoma cell
4
glioma cell
4
hepatic stellate cell
4
immortal neural cell line cell
4
metastatic melanoma
4
nephron progenitor
4
pancreatic cell line
4
pancreatic ductal cell
4
prostate gland
4
rhabdomyosarcoma cell
4
smooth muscle cell of the coronary artery
4
subcutaneous adipose tissue
4
tracheal epithelial cell
3
B-lymphocyte
3
COLO-320 cell
3
COLO205
3
HepG2
3
S-shaped body
3
adipocyte
3
cardiac precursors (cardiac muscle cell)
3
chronic lymphocytic leukemia cell
3
epithelial ovarian cancer cell
3
fibroblast
3
fibroblast of cardiac tissue
3
heart
3
hematopoietic cell
3
kidney interstitial cell
3
leukemic stem cell
3
liver
3
lung fibroblast cell line
3
lymphoblast
3
mammary gland epithelial cell
3
meso-epithelial cell
3
monocyte
3
mononuclear cell of bone marrow
3
multiple myeloma cell line
3
natural killer cell
3
pancreatic ductal adenocarcinoma
3
placenta
3
plasma cell
3
pre-B acute lymphoblastic leukemia cell
3
preadipocyte
3
prostate derived cell line
3
umbilical cord mesenchymal stem cell line cell
2
143B
2
22Rv1
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A-673 cell
2
A549
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
AGS cell
2
ALL-SIL cell
2
Adipose stromal cell
2
AsPC-1 cell
2
B cell
2
B-cell lymphoma cell
2
BCBL-1 cell
2
BE(2)-C
2
BEAS-2B cell
2
BG03
2
BICR 31
2
BJ cell
2
BT-474 cell
2
BT-549 cell
2
Burkitt's lymphoma
2
BxPC-3 cell
2
C666-1 cell
2
CA46 cell
2
CAL-51 cell
2
CCRF-CEM cell
2
CD1c-positive myeloid dendritic cell
2
CD34-positive, CD38-negative hematopoietic stem cell
2
CD8-Positive T-Lymphocytes
2
CFPAC-1 cell
2
CHL-1 cell
2
CHP-134 cell
2
CMK
2
COLO 741 cell
2
CTV-1 cell
2
CaSki cell
2
Caco-2 cell
2
Caki-1 cell
2
Calu-1 cell
2
Calu-3 cell
2
D283 Med cell
2
D341 Med cell
2
DK cell
2
DLD-1 cell
2
DND-41 cell
2
DOHH-2 cell
2
DU 145 cell
2
Daudi
2
Detroit562
2
EAhy 926 cell
2
EOL-1 cell
2
EndoC_BH1
2
FaDu cell
2
Fallopian Tube Carcinoma
2
G-401 cell
2
GM06990
2
GM10847
2
GM12864
2
GM12865
2
GM12866
2
GM12872
2
GM12873
2
GM12875
2
GM12878
2
GM12891
2
GM12892
2
GM18505
2
GM18526
2
GM18951
2
GM19099
2
GM19193
2
GM19238
2
GM19239
2
GM19240
2
GM23248
2
GRANTA-519 cell
2
H1-hESC
2
HAC cell
2
HAP-1
2
HBMEC cell
2
HCC-827 cell
2
HCC-95 cell
2
HCC1599 cell
2
HCC1806 cell
2
HCC1937 cell
2
HCC1954 cell
2
HCC2157 cell
2
HCC3153 cell
2
HCC70 cell
2
HCT-116 cell
2
HCT-15 cell
Date released
2
February, 2021
2
September, 2022
1
February, 2020
1
January, 2020
1
June, 2020
1
May, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
candidate regulatory elements
files.file_type!
txt
Showing 2 of 2 results
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Download
FileSet
DSR248LDD
released
Annotation file set
: Histone modifications annotation for Gonad A-1847 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR242CZW
released
Annotation file set
: Binding sites annotation for Gonad A-1847 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP