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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
34
muscle of arm
32
fibroblast
31
muscle of leg
25
adipose tissue
23
adipocyte
21
pericyte cell
19
subcutaneous adipose tissue
19
tibial nerve
16
tibial artery
15
mesenchymal stem cell
15
osteoblast
14
fibroblast of cardiac tissue
13
omental fat pad
12
foreskin fibroblast
10
fibroblast of lung
10
gastrocnemius medialis
10
hepatic stellate cell
10
pancreatic stellate cell
10
skin fibroblast
8
fibroblast of dermis
7
chondrocyte
7
mesangial cell
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
GM23248
5
Mesangial Cell
5
cartilage tissue
5
gastrocnemius medialis(Muscle - Skeletal)
5
limb
4
adult endothelial progenitor cell
4
bone tissue
4
lower leg skin
4
preadipocyte
4
visceral abdominal adipose tissue
3
brain pericyte
3
fibroblast of peridontal ligament
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
hindlimb muscle
2
muscle of leg
2
HT1080
2
adipose tissue derived mesenchymal stem cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
arm bone
2
articular chondrocyte
2
cardiac fibroblast
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
femur
2
fibroblast of gingiva
2
leg bone
2
luteal cell
2
skin of forearm
2
stromal cell
2
stromal cell of bone marrow
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic fibroblast
1
fibroblast of arm
1
forelimb muscle
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
quiescent pancreatic stellate cell
1
skin - sun exposed (lower leg)
1
subcutaneous abdominal adipose tissue
1
white adipose cell
1
white adipose tissue
Organ
5
connective tissue
5
limb
5
skin of body
0
nerve
Life stage
2
adult
Date released
2
February, 2021
2
September, 2022
1
June, 2020
Software used
3
macs
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
candidate regulatory elements
Showing 5 of 5 results
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Download
FileSet
DSR448QKS
released
Annotation file set
: Target gene predictions for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR689DCS
released
Annotation file set
: Chromatin states for BSS00476 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR263KHK
released
Annotation file set
: Histone modifications annotation for Epidermis Dermal_fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337EJT
released
Annotation file set
: Binding sites annotation for Epidermis Dermal_fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR757SGA
released
Annotation file set
: Accessible chromatin annotation for Epidermis Dermal fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP