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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
34
muscle of arm
31
muscle of leg
26
muscle of back
19
tibial nerve
16
tibial artery
13
psoas muscle
11
skeletal muscle satellite cell
10
gastrocnemius medialis
10
skeletal muscle tissue
9
muscle of trunk
9
skeletal muscle fiber
7
type I muscle cell
7
type II muscle cell
6
esophagus muscularis mucosa
5
GM23248
5
LHCN-M2
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
limb
5
stomach smooth muscle
4
lower leg skin
4
myotube
4
skeletal muscle cell
3
A673
3
SJCRH30
3
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
arm bone
2
cardiac muscle myoblast
2
femur
2
gastroesophageal sphincter
2
leg bone
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
somatic muscle myotube
1
aortic smooth muscle cell
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
fibroblast of arm
1
forelimb muscle
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - sun exposed (lower leg)
1
smooth muscle tissue
Organ
5
connective tissue
5
limb
5
skin of body
0
musculature of body
0
nerve
Life stage
2
adult
Date released
2
February, 2021
2
September, 2022
1
June, 2020
Software used
3
macs
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
candidate regulatory elements
Showing 5 of 5 results
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Download
FileSet
DSR448QKS
released
Annotation file set
: Target gene predictions for BSS00476 GM23248 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR689DCS
released
Annotation file set
: Chromatin states for BSS00476 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR263KHK
released
Annotation file set
: Histone modifications annotation for Epidermis Dermal_fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337EJT
released
Annotation file set
: Binding sites annotation for Epidermis Dermal_fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR757SGA
released
Annotation file set
: Accessible chromatin annotation for Epidermis Dermal fibroblast from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP