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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
cell line
1
stem cell
Biosample term
130
monocyte
52
heart
46
stomach
44
brain
44
kidney
43
CD8-positive, alpha-beta T cell
37
endothelial cell
37
islet of Langerhans
35
lung
34
adrenal gland
34
muscle of arm
34
placenta
34
retina
34
small intestine
31
fibroblast
31
hepatocyte
31
muscle of leg
30
B cell
30
liver
29
large intestine
28
thymus
27
common myeloid progenitor, CD34-positive
26
left lung
26
macrophage
26
muscle of back
24
hematopoietic multipotent progenitor cell
24
pancreatic ductal cell
23
CD14-positive monocyte
23
adipocyte
23
adipose tissue
23
heart left ventricle
23
regulatory T cell
23
right lung
23
smooth muscle cell
22
right kidney
21
pericyte cell
21
renal pelvis
20
epithelial cell of proximal tubule
20
pigmented layer of retina
20
renal cortex interstitium
19
T cell
19
spleen
19
tibial nerve
18
CD4-positive, alpha-beta memory T cell
18
coronary artery
18
glomerular endothelial cell
18
left kidney
18
pancreatic beta cell
17
T-helper 1 cell
17
caudate nucleus
17
pancreatic alpha cell
16
body of pancreas
16
endothelial cell of hepatic sinusoid
16
natural killer cell
16
pancreas
16
spinal cord
16
subcutaneous adipose tissue
15
T-helper 17 cell
15
astrocyte
15
embryonic stem cell
15
mesenchymal stem cell
15
osteoblast
15
pancreatic acinar cell
15
pancreatic delta cell
15
right atrium auricular region
15
tibial artery
14
CD8-positive, alpha-beta memory T cell
14
endothelial cell of umbilical vein
14
excitatory neuron
14
frontal cortex
14
keratinocyte
14
retinal pigment epithelial cell
14
trophoblast cell
13
cerebellum
13
mammary gland epithelial cell
13
substantia nigra
12
T-helper 2 cell
12
ascending aorta
12
heart right ventricle
12
mononuclear cell
12
sigmoid colon
12
skeletal muscle myoblast
11
cardiomyocytes
11
erythroblast
11
foreskin keratinocyte
11
neutrophil
11
ovary
11
psoas muscle
11
putamen
11
skeletal muscle satellite cell
11
thyroid gland
10
Ammon's horn
10
fibroblast of lung
10
foreskin fibroblast
10
gastrocnemius medialis
10
mammary epithelial cell
10
omental fat pad
10
pancreatic stellate cell
10
testis
9
extended pluripotent stem (EPS) cells
9
fibroblast of cardiac tissue
9
induced pluripotent stem cell
9
layer of hippocampus
9
neural progenitor cell
9
skeletal muscle tissue
9
transverse colon
8
T-cell acute lymphoblastic leukemia
8
aorta
8
bronchial epithelial cell
8
cardiac muscle cell
8
cardiomyocytes (cardiac muscle cell)
8
chorionic villus
8
endocrine pancreas
8
fibroblast of dermis
8
glomerular visceral epithelial cell
8
glutamatergic neuron
8
hepatic stellate cell
8
left cardiac atrium
8
memory B cell
8
muscle of trunk
8
progenitor cell of endocrine pancreas
8
prostate gland
8
skeletal muscle fiber
8
temporal lobe
7
CD4-positive helper T cell
7
CD4-positive, alpha-beta T cell
7
Peyer's patch
7
amygdala
7
chorion membrane
7
hypothalamus
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
7
mesendoderm
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
neuronal stem cell
7
skin fibroblast
7
upper lobe of left lung
6
angular gyrus
6
anterior cingulate cortex
6
breast epithelium
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
colon epithelial cell
6
colonic mucosa
6
cortical cell of adrenal gland
6
dendritic cell
6
enterocyte
6
esophagus
6
esophagus muscularis mucosa
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
6
gamma-delta T cell
6
globus pallidus
6
kidney glomerular epithelial cell
6
kidney interstitial cell
6
left renal pelvis
6
midbrain
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
nucleus accumbens
6
plasma cell
6
thoracic aorta
6
trophoblast
6
type I muscle cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD1c-positive myeloid dendritic cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
Organ
1
embryo
Life stage
1
embryonic
Date released
1
August, 2017
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
annotation_type!
candidate regulatory elements
biosample_term_name!
cingulate gyrus
biosample_type!
cell line
month_released!
August, 2021
Showing 1 of 1 results
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Download
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP