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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
4
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
1
bed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
6
cell line
Biosample term
34
K562
14
GM12878
7
GM19240
6
GM06990
6
GM19238
6
GM19239
6
HAP-1
6
HL-60
6
NAMALWA cell
6
OCI-LY7
5
CMK
5
GM12875
5
GM12891
5
GM12892
5
RPMI8226
4
GM18505
4
GM19099
4
GM19193
4
KBM-7
3
GM10847
3
GM12872
3
GM12873
3
GM18526
3
GM18951
3
NB4
3
peripheral blood stem cell
2
DOHH2
2
SU-DHL-6
2
SUDHL6
2
blood
2
peripheral blood mononuclear cell
1
cerebrospinal fluid
1
whole blood
Organ
6
blood
6
bodily fluid
Life stage
2
adult
Date released
2
February, 2021
2
September, 2022
1
June, 2020
1
May, 2021
Software used
3
macs
1
abc
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
annotation_type!
candidate regulatory elements
biosample_term_name!
foreskin fibroblast
Showing 6 of 6 results
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Download
FileSet
DSR765USM
released
Annotation file set
: Target gene predictions for BSS00491 HAP-1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR296VLY
released
Annotation file set
: Chromatin states for BSS00491 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR956RSG
released
Annotation file set
: Histone modifications annotation for Blood HAP1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR497ETD
released
Annotation file set
: Binding sites annotation for Blood HAP1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR155AOX
released
Annotation file set
: enhancer-gene predicton of HAP1 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR934MXE
released
Annotation file set
: Accessible chromatin annotation for Blood HAP1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP