Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
1
chromatin state
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
cell line
1
primary cell
Biosample term
32
fibroblast
25
adipose tissue
23
adipocyte
21
pericyte cell
20
spinal cord
19
subcutaneous adipose tissue
15
mesenchymal stem cell
15
osteoblast
14
fibroblast of cardiac tissue
13
omental fat pad
12
foreskin fibroblast
10
fibroblast of lung
10
hepatic stellate cell
10
pancreatic stellate cell
10
skin fibroblast
8
fibroblast of dermis
7
chondrocyte
7
mesangial cell
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
C1 segment of cervical spinal cord
5
Fibroblast
5
GM23248
5
Mesangial Cell
5
cartilage tissue
4
adult endothelial progenitor cell
4
bone tissue
4
preadipocyte
4
visceral abdominal adipose tissue
3
brain pericyte
3
fibroblast of peridontal ligament
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
HT1080
2
adipose tissue derived mesenchymal stem cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
articular chondrocyte
2
astrocyte of the spinal cord
2
cardiac fibroblast
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
fibroblast of gingiva
2
luteal cell
2
stromal cell
2
stromal cell of bone marrow
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
subcutaneous abdominal adipose tissue
1
white adipose cell
1
white adipose tissue
Disease term
2
fibrosarcoma
Organ
3
connective tissue
1
adipose tissue
0
spinal cord
Life stage
3
adult
Date released
2
September, 2022
1
February, 2020
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
candidate regulatory elements
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR810CKU
released
Annotation file set
: Target gene predictions for BSS00709 HT1080 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488OIF
released
Annotation file set
: Chromatin states for BSS00709 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR001GEH
released
Annotation file set
: Gene expression levels of Adipose mesenchymal stem cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP