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Schema
Clear Filters
Annotation type
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
chromatin state
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
2636
whole blood
135
monocyte
90
fibroblast
88
endothelial cell
86
head of caudate nucleus
73
heart
71
macrophage
67
stomach
66
CD8-positive, alpha-beta T cell
66
kidney
66
smooth muscle cell
64
T-cell
63
HeLa-S3
60
brain
59
dorsolateral prefrontal cortex
56
CD4-positive, alpha-beta T cell
56
placenta
55
A549
55
stimulated activated CD4-positive, alpha-beta T cell
53
H1-hESC
51
muscle of arm
49
B cell
49
adrenal gland
49
lung
48
hepatocyte
48
posterior cingulate gyrus
47
neural progenitor cell
47
small intestine
45
islet of Langerhans
44
muscle of leg
43
large intestine
42
natural killer cell
41
K562
41
T cell
41
left lung
41
muscle of back
40
adipocyte
39
common myeloid progenitor, CD34-positive
37
liver
37
retina
37
thymus
36
hematopoietic multipotent progenitor cell
34
pericyte
34
right lung
33
activated CD4-positive, alpha-beta T cell
33
heart left ventricle
32
cardiac muscle cell
32
glutamatergic neuron
32
right kidney
31
CD14-positive monocyte
31
pancreatic ductal cell
31
renal cortex interstitium
31
renal pelvis
30
keratinocyte
29
astrocyte
27
left kidney
27
spinal cord
27
stimulated activated CD8-positive, alpha-beta memory T cell
26
T-helper 1 cell
25
naive thymus-derived CD4-positive, alpha-beta T cell
24
MCF-7
24
adipose tissue
24
epithelial cell of proximal tubule
24
neuron
24
pancreas
24
spleen
23
CD4-positive, alpha-beta memory T cell
23
EndoC_BH1
23
T-helper 17 cell
23
dendritic cell
23
heart right ventricle
23
regulatory T cell
22
GABAergic neuron
22
naive thymus-derived CD8-positive, alpha-beta T cell
22
tibial nerve
21
endothelial cell of lymphatic vessel
21
ovary
21
pericyte cell
20
HCT116
20
T-helper 2 cell
20
body of pancreas
20
breast cancer cell
20
glomerular endothelial cell
20
pigmented layer of retina
19
HFFc6
18
CD8-positive, alpha-beta memory T cell
18
caudate nucleus
18
coronary artery
18
embryonic stem cell
18
pancreatic beta cell
18
subcutaneous adipose tissue
18
tibial artery
17
HepG2
17
endocardial cell
17
erythroblast
17
hepatic stellate cell
17
pancreatic acinar cell
17
pancreatic alpha cell
17
psoas muscle
17
retinal pigment epithelial cell
17
right atrium auricular region
17
trophoblast cell
16
H9
16
endothelial cell of hepatic sinusoid
16
endothelial cell of umbilical vein
16
induced pluripotent stem cell
16
mesenchymal stem cell
16
osteoblast
15
activated T-cell
15
foreskin fibroblast
15
frontal cortex
15
gastrocnemius medialis
15
mast cell
15
pancreatic delta cell
15
sigmoid colon
15
thyroid gland
15
upper lobe of left lung
14
GM12878
14
activated CD8-positive, alpha-beta memory T cell
14
omental fat pad
14
skeletal muscle satellite cell
13
ascending aorta
13
excitatory neuron
13
fibroblast of cardiac tissue
13
naive B cell
13
skeletal muscle myoblast
13
testis
13
transverse colon
12
cerebellum
12
foreskin keratinocyte
12
glomerular visceral epithelial cell
12
left cardiac atrium
12
lymphoblastoid cell line
12
mammary epithelial cell
12
mononuclear cell
12
neuroblastoma cell
12
putamen
12
right lobe of liver
12
thyroid follicular cell
11
fibroblast of lung
11
mammary gland epithelial cell
11
muscle of trunk
11
neutrophil
11
progenitor cell
11
progenitor cell of endocrine pancreas
11
substantia nigra
10
Ammon's horn
10
Peyer's patch
10
Rhabdomyosarcoma
10
gastric cancer cell
10
inflammatory macrophage
10
mesothelial cell
10
pancreatic stellate cell
10
skeletal muscle tissue
9
aorta
9
bronchial epithelial cell
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
fibroblast of dermis
9
left renal cortex interstitium
9
liposarcoma
9
megakaryocyte
9
memory B cell
9
oligodendrocyte
9
pancreatic A cell
9
prostate gland
9
type B pancreatic cell
8
B Cell
8
IMR-90
8
WERI-Rb-1
8
choroid plexus epithelial cell
8
endodermal cell
8
fibroblast cell line
8
layer of hippocampus
8
lymphocyte
8
neuronal stem cell
8
pituitary stalk
8
right renal pelvis
8
skeletal muscle fiber
8
skin fibroblast
8
temporal lobe
7
B-lymphoblastoid cell line
7
OCI-LY7
7
Schwann cell
7
amygdala
7
cardiomyocytes (cardiac muscle cell)
7
cell of skeletal muscle
7
cholangiocyte
7
colon epithelial cell
7
colonic mucosa
7
dermis blood vessel endothelial cell
7
effector memory CD8-positive, alpha-beta T cell
7
endocrine pancreas
7
epithelial cell of prostate
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
kidney tubule cell
7
left renal pelvis
7
leukocyte
7
limb
Organ
4
skin of body
Life stage
2
adult
Date released
2
September, 2022
1
July, 2026
1
June, 2020
Software used
1
chromhmm
1
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
2
EpiMap
1
ChIP-Atlas
1
ENCODE-rE2G
RFA
4
AMP
annotation_type!
candidate regulatory elements
Showing 4 of 4 results
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Download
FileSet
DSR837063
released
Annotation file set
: Target gene predictions for RPMI7951 (EFO:0005712) derived from ENCODE-rE2G (ENCSR517RZQ).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR395YGG
released
Annotation file set
: Target gene predictions for BSS01536 RPMI7951 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR011XDK
released
Annotation file set
: Chromatin states for BSS01536 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR752EOW
released
Annotation file set
: Accessible chromatin annotation for Epidermis RPMI-7951 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP