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Citing CMDGA
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Annotation type
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
10
prostate gland
8
epithelial cell of prostate
6
22Rv1
5
PC-3
5
RWPE1
4
LNCAP
4
LNCaP clone FGC
3
VCaP cell
2
C4-2B
2
RWPE2
1
luminal epithelial cell of prostatic duct
1
prostate
Organ
5
prostate gland
Life stage
2
adult
Date released
2
February, 2021
2
September, 2022
1
June, 2020
Software used
3
macs
1
chromhmm
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
candidate regulatory elements
organ_slims!
lymph node
Showing 5 of 5 results
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Download
FileSet
DSR004YQT
released
Annotation file set
: Target gene predictions for BSS01538 RWPE1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR663JPS
released
Annotation file set
: Chromatin states for BSS01538 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR877FMG
released
Annotation file set
: Histone modifications annotation for Prostate RWPE-1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR399MSB
released
Annotation file set
: Binding sites annotation for Prostate RWPE-1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR763QKG
released
Annotation file set
: Accessible chromatin annotation for Prostate RWPE-1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP