Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Clear Filters
Annotation type
2
differential activity
candidate regulatory elements
1
gene expression
1
target gene predictions
Annotation Category
2
Gene expression levels
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
RNA-seq
File set status
4
released
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2636
whole blood
131
monocyte
59
HeLa-S3
53
H1-hESC
53
heart
52
kidney
46
neural progenitor cell
46
stomach
45
islet of Langerhans
45
liver
44
CD8-positive, alpha-beta T cell
44
brain
44
endothelial cell
41
A549
38
macrophage
35
lung
34
K562
34
adrenal gland
34
hepatocyte
34
muscle of arm
34
placenta
34
retina
34
small intestine
32
fibroblast
31
muscle of leg
30
B cell
29
large intestine
28
thymus
26
common myeloid progenitor, CD34-positive
26
left lung
26
smooth muscle cell
25
adipocyte
25
muscle of back
25
pancreatic ductal cell
24
adipose tissue
24
hematopoietic multipotent progenitor cell
24
subcutaneous adipose tissue
23
CD14-positive monocyte
23
EndoC_BH1
23
heart left ventricle
23
regulatory T cell
23
right lung
22
right kidney
21
T cell
21
epithelial cell of proximal tubule
21
pericyte cell
21
renal pelvis
21
spinal cord
20
breast cancer cell
20
pigmented layer of retina
20
renal cortex interstitium
19
glomerular endothelial cell
19
spleen
19
tibial nerve
18
CD4-positive, alpha-beta memory T cell
18
HFFc6
18
embryonic stem cell
18
keratinocyte
18
left kidney
18
pancreatic beta cell
17
MCF-7
17
T-helper 1 cell
17
caudate nucleus
17
coronary artery
17
natural killer cell
17
pancreatic acinar cell
17
pancreatic alpha cell
16
endothelial cell of hepatic sinusoid
16
induced pluripotent stem cell
16
pancreas
15
HepG2
15
T-helper 17 cell
15
astrocyte
15
body of pancreas
15
mesenchymal stem cell
15
osteoblast
15
pancreatic delta cell
15
right atrium auricular region
15
tibial artery
14
CD8-positive, alpha-beta memory T cell
14
GM12878
14
retinal pigment epithelial cell
14
skeletal muscle satellite cell
14
trophoblast cell
13
endothelial cell of umbilical vein
13
excitatory neuron
13
fibroblast of cardiac tissue
13
frontal cortex
13
substantia nigra
12
ascending aorta
12
heart right ventricle
12
lymphoblastoid cell line
12
mononuclear cell
12
neuroblastoma cell
12
sigmoid colon
12
skeletal muscle myoblast
11
T-helper 2 cell
11
cardiac muscle cell
11
erythroblast
11
foreskin fibroblast
11
foreskin keratinocyte
11
mammary gland epithelial cell
11
neutrophil
11
omental fat pad
11
ovary
11
psoas muscle
11
putamen
11
thyroid gland
10
Ammon's horn
10
Rhabdomyosarcoma
10
cerebellum
10
fibroblast of lung
10
gastric cancer cell
10
glomerular visceral epithelial cell
10
left cardiac atrium
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
skeletal muscle tissue
10
testis
9
aorta
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
skeletal muscle
9
transverse colon
9
visceral fat
8
B-lymphoblastoid cell line
8
fibroblast cell line
8
fibroblast of dermis
8
gastrocnemius medialis
8
hepatic stellate cell
8
layer of hippocampus
8
lymphocyte
8
mammary epithelial cell
8
pituitary stalk
8
prostate gland
8
skeletal muscle fiber
8
skin fibroblast
8
temporal lobe
7
CD4-positive helper T cell
7
CD4-positive, alpha-beta T cell
7
H9
7
amygdala
7
bronchial epithelial cell
7
cardiomyocytes (cardiac muscle cell)
7
colon epithelial cell
7
endocrine pancreas
7
epithelial cell of prostate
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
mature neutrophil
7
memory B cell
7
mesendoderm
7
muscle of trunk
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
neuronal stem cell
7
upper lobe of left lung
6
22Rv1
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Caco-2 cell
6
Chondroid Chordoma
6
GM06990
6
GM12865
6
HUES8
6
Jurkat
6
Peyer's patch
6
WERI-Rb-1
6
anterior cingulate cortex
6
aorta wall
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
choroid plexus epithelial cell
6
endodermal cell
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
nucleus accumbens
6
plasma cell
6
smooth muscle cell of the coronary artery
6
thoracic aorta
6
trophoblast
6
type I muscle cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD1c-positive myeloid dendritic cell
Organ
4
artery
4
blood vessel
4
vasculature
Life stage
4
adult
Date released
4
October, 2025
Software used
2
dreamlet
1
scanpy
1
sce2g
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
4
STARNET
RFA
4
AMP
annotation_type!
candidate regulatory elements
Showing 4 of 4 results
table-tab-icon
matrix-icon
FileSet
DSR936629
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human artery, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR849587
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human artery, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR007425
released
Annotation file set
: The dataset contains gene expression levels in human artery, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR668686
released
Annotation file set
: The dataset contains cCRE–target gene links in human artery, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP