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Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
eQTL
1
target gene predictions
Annotation Category
2
Gene expression levels
1
Genetic variant effects
1
Target gene links
Annotation type Category
3
RNA-seq
1
pCHi-C
Available data
2
tsv
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
53
heart
52
kidney
46
stomach
44
brain
44
islet of Langerhans
36
liver
35
lung
34
adrenal gland
34
muscle of arm
34
placenta
34
retina
34
small intestine
31
muscle of leg
29
large intestine
28
thymus
26
left lung
26
muscle of back
23
heart left ventricle
23
right lung
22
right kidney
21
renal pelvis
20
pigmented layer of retina
20
renal cortex interstitium
19
spleen
19
tibial nerve
18
coronary artery
18
left kidney
17
caudate nucleus
17
pancreas
17
spinal cord
16
body of pancreas
16
right atrium auricular region
16
tibial artery
14
frontal cortex
13
cerebellum
13
heart right ventricle
13
ovary
13
psoas muscle
13
putamen
13
sigmoid colon
13
substantia nigra
12
ascending aorta
11
testis
11
thyroid gland
11
transverse colon
10
Ammon's horn
10
gastrocnemius medialis
10
layer of hippocampus
10
left cardiac atrium
10
prostate gland
10
skeletal muscle tissue
9
aorta
9
muscle of trunk
9
temporal lobe
9
upper lobe of left lung
8
chorionic villus
8
endocrine pancreas
7
Peyer's patch
7
amygdala
7
chorion membrane
7
hypothalamus
7
midbrain
7
nucleus accumbens
7
occipital lobe
7
right lobe of liver
7
thoracic aorta
7
trophoblast
6
angular gyrus
6
anterior cingulate cortex
6
breast epithelium
6
cerebellum (Hemisphere)
6
colonic mucosa
6
esophagus
6
esophagus muscularis mucosa
6
globus pallidus
6
left renal cortex interstitium
6
left renal pelvis
6
right cardiac atrium
6
right renal cortex interstitium
6
right renal pelvis
6
superior temporal gyrus
6
uterus
6
vagina
5
C1 segment of cervical spinal cord
5
cingulate gyrus
5
duodenal mucosa
5
esophagus squamous epithelium
5
eye
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
limb
5
medulla oblongata
5
mucosa of rectum
5
pons
5
skin of body
5
stomach smooth muscle
5
tongue
5
urinary bladder
4
Brodmann (1909) area 46
4
cortex of kidney
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
lower leg skin
4
middle frontal gyrus
4
muscle layer of colon
4
muscle layer of duodenum
4
parathyroid adenoma
4
umbilical cord
3
cerebellar cortex
3
dorsolateral prefrontal cortex
3
embryonic facial prominence
3
germinal matrix
3
inferior parietal cortex
3
prefrontal cortex
3
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
amnion
2
arm bone
2
blood
2
breast carcinoma
2
endometrium cancer
2
fallopian tube
2
femur
2
first pancreatic bud
2
gastroesophageal sphincter
2
germinal center
2
kidney epithelium
2
leg bone
2
mammary gland
2
minor salivary gland
2
mucosa of stomach
2
pancreatic ductal cell
2
pituitary gland
2
respiratory system smooth muscle
2
skeletal muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fetal heart
1
forelimb muscle
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
intestinal epithelium
1
kidney - cortex
1
kidney - medulla
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
metanephros
1
mid-frontal lobe
1
mitral valve
Organ
3
brain
1
epithelium
1
esophagus
Life stage
2
adult
Date released
1
February, 2021
1
January, 2022
1
March, 2020
1
March, 2024
Software used
2
r
1
nospecificsoft_customcode
1
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
candidate regulatory elements
organ_slims!
connective tissue
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR608BGI
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Esophagus - Mucosa.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR129VOZ
released
Annotation file set
: DLPFC naive eQTL of studay CommonMind from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR368WLT
released
Annotation file set
: Gene expression summary of TPM of dorsolateral prefrontal cortex from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR360WGG
released
Annotation file set
: A target gene prediction annotation in Human Dorsolateral Prefrontal Cortex (DLPFC) of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP