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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
16
endothelial cell of hepatic sinusoid
14
endothelial cell of umbilical vein
6
colon epithelial cell
6
enterocyte
6
fibroblast of pulmonary artery
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
Peritubular Capillary Endothelial Cell
5
pulmonary artery endothelial cell
4
aortic endothelial cell
4
dermis blood vessel endothelial cell
4
enteric smooth muscle cell
4
kidney capillary endothelial cell
4
pancreatic endothelial cell
3
brain microvascular endothelial cell
3
fibroblast of the aortic adventitia
3
smooth muscle cell of the coronary artery
2
capillary endothelial cell
2
endothelial cell of coronary artery
2
enterocyte of epithelium of small intestine
2
paneth cell
2
small intestine goblet cell
1
brain microvascular endothelial cell
1
aortic smooth muscle cell
1
intestinal epithelial cell
1
placental villus capillary endothelial cell
Organ
2
epithelium
2
intestine
2
small intestine
0
blood vessel
Date released
2
November, 2021
Software used
1
abc
1
macs
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
RFA
2
ENCODE3
annotation_type!
candidate regulatory elements
Showing 2 of 2 results
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Download
FileSet
DSR802OCO
released
Annotation file set
: Target gene predictions of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR273VIV
released
Annotation file set
: Accessible chromatin annotation of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE