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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
3
target gene predictions
2
chromatin state
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
5
cis-regulatory elements
3
Target gene links
Annotation type Category
6
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
2
bed bed9
File set status
8
released
Genome assembly (visualization)
8
hg19
2
GRCh38
Organism
8
Homo sapiens
Biosample type
5
primary cell
3
cell line
Biosample term
10
prostate gland
8
epithelial cell of prostate
6
22Rv1
5
PC-3
5
RWPE1
4
LNCAP
4
LNCaP clone FGC
3
VCaP cell
2
C4-2B
2
RWPE2
1
luminal epithelial cell of prostatic duct
1
pericardium fibroblast
1
prostate
Organ
8
epithelium
8
prostate gland
0
pericardium
Life stage
4
unknown
Date released
4
September, 2022
2
February, 2021
1
June, 2020
1
May, 2021
Software used
3
macs
2
chromhmm
2
r
1
abc
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
annotation_type!
candidate regulatory elements
organ_slims!
limb
Showing 8 of 8 results
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Download
FileSet
DSR120KRM
released
Annotation file set
: Target gene predictions for BSS00309 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR498KQI
released
Annotation file set
: Target gene predictions for BSS00308 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR275EDQ
released
Annotation file set
: Chromatin states for BSS00309 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR660GSF
released
Annotation file set
: Chromatin states for BSS00308 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR783HIA
released
Annotation file set
: Histone modifications annotation for Prostate PrEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR324LJC
released
Annotation file set
: Binding sites annotation for Prostate PrEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR327KAR
released
Annotation file set
: enhancer-gene predicton of epithelial_cell_of_prostate-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR008LFO
released
Annotation file set
: Accessible chromatin annotation for Prostate PrEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP