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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
2
ChIP-seq
1
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
131
monocyte
53
HeLa-S3
51
H1-hESC
44
CD8-positive, alpha-beta T cell
44
islet of Langerhans
41
endothelial cell
38
neural progenitor cell
32
fibroblast
32
macrophage
30
hepatocyte
28
retina
25
pancreatic ductal cell
24
kidney
23
EndoC_BH1
22
K562
21
liver
21
smooth muscle cell
20
breast cancer cell
20
pigmented layer of retina
19
HFFc6
19
adipocyte
19
epithelial cell of proximal tubule
19
pericyte cell
19
subcutaneous adipose tissue
18
embryonic stem cell
17
glomerular endothelial cell
17
pancreatic acinar cell
17
pancreatic beta cell
17
regulatory T cell
16
induced pluripotent stem cell
15
CD14-positive monocyte
15
pancreatic alpha cell
14
B cell
14
heart
14
keratinocyte
13
astrocyte
13
excitatory neuron
12
GM12878
12
heart left ventricle
12
lymphoblastoid cell line
12
neuroblastoma cell
12
osteoblast
12
pancreatic delta cell
12
retinal pigment epithelial cell
11
T cell
11
T-helper 1 cell
11
adipose tissue
11
brain
11
erythroblast
11
pancreas
11
right atrium auricular region
11
tibial nerve
10
Rhabdomyosarcoma
10
caudate nucleus
10
frontal cortex
10
gastric cancer cell
10
natural killer cell
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
9
HepG2
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
mesenchymal stem cell
9
putamen
9
skeletal muscle satellite cell
8
Ammon's horn
8
B-lymphoblastoid cell line
8
T-helper 17 cell
8
cardiac muscle cell
8
fibroblast cell line
8
glomerular visceral epithelial cell
8
mammary epithelial cell
8
pituitary stalk
8
skeletal muscle fiber
8
skeletal muscle myoblast
7
CD4-positive helper T cell
7
CD4-positive, alpha-beta T cell
7
H9
7
Jurkat
7
MCF-7
7
amygdala
7
cardiomyocytes (cardiac muscle cell)
7
cerebellum
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
foreskin fibroblast
7
hepatic stellate cell
7
left cardiac atrium
7
mature neutrophil
7
memory B cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
neuronal stem cell
7
stomach
7
substantia nigra
6
Chondroid Chordoma
6
HUES8
6
anterior cingulate cortex
6
body of pancreas
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
fibroblast of cardiac tissue
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
lymphocyte
6
mammary gland epithelial cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
neutrophil
6
nucleus accumbens
6
omental fat pad
6
placenta
6
plasma cell
6
type I muscle cell
5
cardiac fibroblast
5
A549
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
CyT49
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
5
GM19240
5
HCT-116 cell
5
IMR-90
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
KARPAS-422 cell
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Plasma Cell
5
Podocyte
5
Rh-4 cell
5
SGBS preadipocytes
5
acute myeloid leukemia
5
enterocyte
5
glutamatergic neuron
5
kidney interstitial cell
5
kidney loop of Henle thin ascending limb epithelial cell
5
mast cell
5
mesangial cell
5
osteosarcoma
5
prostate cancer cell line
5
skin fibroblast
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
B-lymphocyte
4
BE(2)-C
4
BJ cell
4
COLO205
4
Caco-2 cell
4
GM06990
4
GM12864
4
GM12865
4
GM18505
4
GM19099
4
GM19193
4
GM19238
4
GM19239
4
HAC cell
4
HAP-1
4
HBMEC cell
4
HEK293
Date released
September, 2022
2
February, 2021
1
June, 2020
1
May, 2021
Software used
3
macs
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
candidate regulatory elements
month_released!
September, 2022
organ_slims!
blood vessel
Showing 4 of 4 results
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Download
FileSet
DSR782OVI
released
Annotation file set
: Gene expression annotation of multipotent stem cell_multipotent cardiac progenitor (MCP) PDGFRA+ISL1+ on day 3 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383WGV
released
Annotation file set
: Histone modifications annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR818RAD
released
Annotation file set
: Binding sites annotation for Blood Hematopoietic_Stem_Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR365ACB
released
Annotation file set
: Accessible chromatin annotation for Blood Hematopoietic Stem Cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP