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Schema
Citing CMDGA
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Annotation type
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
41
A549
35
lung
26
left lung
23
right lung
10
fibroblast of lung
9
upper lobe of left lung
7
IMR-90
7
type II pneumocyte
6
PC-9
4
type I pneumocyte
3
NCI-H226 cell
3
NCI-H460 cell
2
WI38
2
lung microvascular endothelial cell
1
endothelial cell of artery
1
lung neuroendocrine cell
Organ
2
epithelium
2
lung
2
vasculature
Life stage
2
unknown
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
candidate regulatory elements
organ_slims!
skeleton
Showing 2 of 2 results
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Download
FileSet
DSR502IOI
released
Annotation file set
: Target gene predictions for BSS01206 lung microvascular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR052EZN
released
Annotation file set
: Chromatin states for BSS01206 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP