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Citing CMDGA
Clear Filters
Annotation type
3
binding sites
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
5
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
16
MCF-7
13
mammary gland epithelial cell
6
luminal epithelial cell of mammary gland
6
mammary epithelial cell
5
fibroblast of mammary gland
4
T47D
4
myoepithelial cell of mammary gland
2
mammary gland
Organ
6
epithelium
6
mammary gland
Date released
3
February, 2021
1
August, 2017
1
June, 2020
1
May, 2021
October, 2022
Software used
4
macs
1
abc
1
chromhmm
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
1
Stephen Parker, UMich
Project
6
AMP
RFA
6
AMP
annotation_type!
candidate regulatory elements
month_released!
October, 2022
organ_slims!
lymph node
Showing 6 of 6 results
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Download
FileSet
DSR374KTP
released
Annotation file set
: Binding sites annotation for Breast Mammary_epithelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR704WVL
released
Annotation file set
: Binding sites annotation for Breast HMLE from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR429QEJ
released
Annotation file set
: Binding sites annotation for Breast HMEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379EHB
released
Annotation file set
: enhancer-gene predicton of mammary_epithelial_cell-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR478XSH
released
Annotation file set
: Accessible chromatin annotation for Breast HMEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR538274
released
Annotation file set
: ChromHMM 13-state model for HMEC
Lab:
Stephen Parker, UMich
Project:
AMP