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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
127
monocyte
43
CD8-positive, alpha-beta T cell
32
endothelial cell
29
fibroblast
28
macrophage
27
common myeloid progenitor, CD34-positive
27
hepatocyte
26
B cell
23
CD14-positive monocyte
21
pericyte cell
21
regulatory T cell
20
smooth muscle cell
18
CD4-positive, alpha-beta memory T cell
18
T cell
17
T-helper 1 cell
17
pancreatic beta cell
16
T-helper 17 cell
16
endothelial cell of hepatic sinusoid
16
pancreatic acinar cell
16
pancreatic delta cell
16
pancreatic ductal cell
15
pancreatic alpha cell
14
CD8-positive, alpha-beta memory T cell
14
astrocyte
13
endothelial cell of umbilical vein
13
natural killer cell
12
T-helper 2 cell
12
excitatory neuron
12
mononuclear cell
11
erythroblast
11
keratinocyte
11
neutrophil
11
skeletal muscle satellite cell
10
fibroblast of lung
10
naive thymus-derived CD4-positive, alpha-beta T cell
10
skeletal muscle myoblast
10
trophoblast cell
9
fibroblast of cardiac tissue
9
mammary gland epithelial cell
9
memory B cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
osteoblast
9
skeletal muscle fiber
8
fibroblast of dermis
8
foreskin keratinocyte
8
glutamatergic neuron
8
pancreatic stellate cell
7
CD4-positive, alpha-beta T cell
7
epithelial cell of proximal tubule
7
glomerular endothelial cell
7
kidney tubule cell
7
mature neutrophil
7
skin fibroblast
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
alternatively activated macrophage
6
colon epithelial cell
6
cortical cell of adrenal gland
6
enterocyte
6
foreskin fibroblast
6
hepatic stellate cell
6
kidney glomerular epithelial cell
6
luminal epithelial cell of mammary gland
6
mesenchymal stem cell
6
naive B cell
6
naive T cell
6
neurosphere
6
olfactory receptor cell
6
pancreatic polypeptide-secreting cell
6
renal cortical epithelial cell
6
retinal pigment epithelial cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
basal cell
5
bronchial epithelial cell
5
cardiac muscle cell
5
central memory CD8-positive, alpha-beta T cell
5
choroid plexus epithelial cell
5
effector memory CD8-positive, alpha-beta T cell
5
epithelial cell of prostate
5
gabaergic neuron
5
glomerular visceral epithelial cell
5
inflammatory macrophage
5
inhibitory neuron
5
kidney epithelial cell
5
pancreatic endothelial cell
4
activated CD4-positive, alpha-beta T cell
4
adipocyte
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
blood vessel smooth muscle cell
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
endothelial cell of lymphatic vessel
4
enteric smooth muscle cell
4
epithelial cell of esophagus
4
fibroblast of breast
4
fibroblast of mammary gland
4
fibroblast of pulmonary artery
4
fibroblast of villous mesenchyme
4
gamma-delta T cell
4
kidney capillary endothelial cell
4
mammary epithelial cell
4
mast cell
4
mature natural killer cell
4
megakaryocyte
4
memory T cell
4
memory regulatory T cell
4
mesothelial cell
4
myoepithelial cell of mammary gland
4
myofibroblast cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle cell
4
smooth muscle cell of the brain vasculature
4
smooth muscle cell of the esophagus
4
type I pneumocyte
3
CD1c-positive myeloid dendritic cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
Schwann cell
3
activated CD8-positive, alpha-beta T cell
3
aortic endothelial cell
3
blood cell
3
brain microvascular endothelial cell
3
ciliated cell
3
club cell
3
endocardial cell
3
enteric neuron
3
fibroblast of peridontal ligament
3
fibroblast of the aortic adventitia
3
glial cell
3
goblet cell
3
iris pigment epithelial cell
3
leukocyte
3
mesangial cell
Organ
1
epithelium
1
trachea
Date released
February, 2021
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
candidate regulatory elements
month_released!
February, 2021
organ_slims!
spinal cord
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR971ETL
released
Annotation file set
: Accessible chromatin annotation for Lung Tracheal epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP