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Schema
Clear Filters
Annotation type
candidate regulatory elements
3
target gene predictions
2
chromatin state
1
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
3
Target gene links
3
cis-regulatory elements
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
4
ChIP-seq
4
DNase-seq
2
RNA-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
2
bed bed9
1
tsv
File set status
8
released
Genome assembly (visualization)
6
hg19
3
GRCh38
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
6
breast epithelium
1
breast
1
breast - mammary tissue
Organ
2860
vasculature
2812
bodily fluid
2809
blood vessel
2805
blood
2652
vein
849
epithelium
493
kidney
392
connective tissue
356
brain
253
pancreas
234
musculature of body
185
heart
180
lung
176
intestine
158
embryo
150
limb
138
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
80
adipose tissue
74
uterus
69
artery
68
stomach
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Life stage
5
adult
Date released
4
September, 2022
1
January, 2022
1
June, 2020
1
March, 2024
1
May, 2021
Software used
3
r
2
chromhmm
1
abc
1
macs
1
qTLtools
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
Collection Tags
4
EpiMap
1
ChIP-Atlas
1
DGA
1
GTEx
1
T1D
1
T2D
1
eQTLCatalogue
RFA
8
AMP
annotation_type!
candidate regulatory elements
Showing 8 of 8 results
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Download
FileSet
DSR865MBK
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Breast - Mammary Tissue.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR572SDG
released
Annotation file set
: Target gene predictions for BSS00146 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097ZWH
released
Annotation file set
: Target gene predictions for BSS00145 breast epithelium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR513JAX
released
Annotation file set
: Chromatin states for BSS00146 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR558QXI
released
Annotation file set
: Chromatin states for BSS00145 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR266AND
released
Annotation file set
: breast eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097EPN
released
Annotation file set
: enhancer-gene predicton of breast_epithelium-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR042SCF
released
Annotation file set
: Accessible chromatin annotation for Breast Breast epithelium from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP