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Schema
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Annotation type
1
accessible chromatin
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
3
olfactory neurosphere cell line
Organ
3322
blood
2852
vasculature
2822
blood vessel
2806
bodily fluid
2653
vein
852
epithelium
792
brain
597
kidney
438
connective tissue
392
heart
309
lung
295
pancreas
245
intestine
240
musculature of body
221
skin of body
205
liver
158
embryo
157
large intestine
150
limb
143
eye
123
adipose tissue
115
extraembryonic component
111
muscle organ
89
stomach
84
uterus
81
bone element
78
artery
76
mammary gland
74
adrenal gland
73
thymus
68
placenta
60
__MARKER__
60
prostate gland
60
small intestine
48
spleen
47
gonad
42
ureter
41
lymph node
39
thyroid gland
36
penis
33
spinal cord
31
esophagus
24
ovary
22
testis
20
skeleton
19
nerve
17
lymphatic vessel
15
lymphoid tissue
13
mouth
13
pituitary gland
12
bronchus
11
bone marrow
10
breast
10
urinary bladder
8
tongue
8
vagina
5
trachea
3
nose
1
embryonic structure
1
gallbladder
1
pericardium
Life stage
2
adult
Date released
2
September, 2022
1
June, 2020
Software used
1
chromhmm
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
Collection Tags
2
EpiMap
1
ChIP-Atlas
RFA
3
AMP
annotation_type!
candidate regulatory elements
Showing 3 of 3 results
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Download
FileSet
DSR153WUM
released
Annotation file set
: Target gene predictions for BSS01392 olfactory neurosphere cell line from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR200PFR
released
Annotation file set
: Chromatin states for BSS01392 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR132DAC
released
Annotation file set
: Accessible chromatin annotation for Others Olf neurosphere from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP