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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
chromatin state
3
target gene predictions
1
accessible chromatin
1
gene expression
Annotation Category
4
cis-regulatory elements
3
Target gene links
1
Gene expression levels
Annotation type Category
6
ChIP-seq
6
DNase-seq
1
ATAC-seq
1
RNA-seq
Available data
7
bed bed3+
1
bigWig
1
tsv
File set status
8
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
8
Homo sapiens
Biosample type
6
cell line
2
tissue
Biosample term
6
HeLa-S3
2
kidney
Disease term
59
chronic kidney disease
57
acute kidney failure
55
Acute kidney failure, unspecified
55
Chronic kidney disease (CKD)
36
lung epithelial-myoepithelial carcinoma
20
age-related macular degeneration
16
Philadelphia-positive myelogenous leukemia
12
large-cell immunoblastic lymphoma
10
breast cancer
10
colorectal adenocarcinoma
10
neuroblastoma
8
prostate adenocarcinoma
6
acute lymphoblastic leukemia
6
cervical adenocarcinoma
6
endometrium adenocarcinoma
6
glioblastoma
6
hepatocellular carcinoma
6
parathyroid gland clear cell adenoma
5
coronary artery disease
4
Burkitt lymphoma
4
acute promyelocytic leukemia
4
anosmia
4
breast ductal adenocarcinoma
4
melanoma
4
osteosarcoma
4
plasma cell myeloma
4
renal cell adenocarcinoma
3
squamous cell carcinoma
2
Ewing sarcoma
2
adenoid cystic carcinoma
2
clear cell renal carcinoma
2
colon carcinoma
2
diabetes mellitus,hypertensive disorder
2
fibrosarcoma
2
glioma
2
hypertensive disorder
2
lung adenocarcinoma
2
lung large cell carcinoma
2
metastatic melanoma
2
pancreatic adenocarcinoma
2
pancreatic ductal adenocarcinoma
2
prostate cancer
2
prostate carcinoma
2
retinoblastoma
2
testicular embryonal carcinoma
1
chronic kidney disease, hypertensive disorder
1
colorectal cancer
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
heart failure
1
hypertensive disorder, chronic kidney disease
1
small cell lung carcinoma
1
type 2 diabetes mellitus
Organ
6
uterus
2
kidney
Life stage
6
adult
Date released
6
September, 2022
1
August, 2021
1
February, 2021
Software used
7
r
1
macs
Lab
6
AMP-T2D consortium
2
Katalin Susztak, Upenn
Project
8
AMP
RFA
6
AMP
2
AMP2
annotation_type!
chromatin state
histone modifications
Showing 8 of 8 results
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Download
FileSet
DSR101KFD
released
Annotation file set
: Candidate regulatory elements for BSS00541 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR295XRW
released
Annotation file set
: Candidate regulatory elements for BSS00531 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR089EEH
released
Annotation file set
: Candidate regulatory elements for BSS00529 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR691KIE
released
Annotation file set
: Target gene predictions for BSS00541 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR653CGH
released
Annotation file set
: Target gene predictions for BSS00531 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR478MAJ
released
Annotation file set
: Target gene predictions for BSS00529 HeLa-S3 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR073KQB
released
Annotation file set
: Accessible chromatin of kidney from Katalin Susztak 75kidney Project ATAC-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR992NTS
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP