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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
candidate regulatory elements
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
3
olfactory neurosphere cell line
Organ
884
epithelium
575
kidney
411
connective tissue
394
brain
299
musculature of body
258
pancreas
240
lung
231
vasculature
228
intestine
201
heart
194
limb
174
blood vessel
169
skin of body
163
bodily fluid
154
blood
138
liver
136
embryo
136
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
28
uterus
22
testis
21
nerve
19
lymphatic vessel
19
ovary
19
thyroid gland
18
lymphoid tissue
17
vein
15
mouth
15
skeleton
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
4
bronchus
3
nose
1
pericardium
Life stage
2
adult
Date released
2
September, 2022
1
June, 2020
Software used
2
r
1
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
chromatin state
annotation_type_category!
HiC
biosample_term_name!
bronchial epithelial cell
Showing 3 of 3 results
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Download
FileSet
DSR019UGB
released
Annotation file set
: Candidate regulatory elements for BSS01392 olfactory neurosphere cell line from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR153WUM
released
Annotation file set
: Target gene predictions for BSS01392 olfactory neurosphere cell line from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR132DAC
released
Annotation file set
: Accessible chromatin annotation for Others Olf neurosphere from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP