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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
1
eQTL
1
gene expression
Annotation Category
4
Genetic variant effects
1
Gene expression levels
Annotation type Category
5
RNA-seq
Available data
5
tsv
File set status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
69
heart
67
stomach
65
kidney
55
brain
52
lung
51
muscle of arm
48
adrenal gland
48
small intestine
46
placenta
43
large intestine
43
muscle of leg
41
islet of Langerhans
41
muscle of back
40
liver
39
left lung
37
retina
37
thymus
34
right lung
32
right kidney
31
renal cortex interstitium
31
renal pelvis
28
spleen
27
left kidney
26
adipose tissue
26
heart left ventricle
24
spinal cord
21
tibial nerve
20
body of pancreas
20
pigmented layer of retina
20
subcutaneous adipose tissue
19
pancreas
18
caudate nucleus
18
coronary artery
18
sigmoid colon
17
ovary
17
right atrium auricular region
16
omental fat pad
16
psoas muscle
16
tibial artery
15
substantia nigra
15
testis
15
thyroid gland
15
transverse colon
14
cerebellum
14
frontal cortex
14
gastrocnemius medialis
14
heart right ventricle
14
putamen
13
ascending aorta
13
muscle of trunk
13
skeletal muscle tissue
13
upper lobe of left lung
12
chorionic villus
12
layer of hippocampus
12
prostate gland
11
Ammon's horn
11
Peyer's patch
11
endocrine pancreas
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
9
aorta
9
breast epithelium
9
esophagus muscularis mucosa
9
esophagus squamous epithelium
9
right renal cortex interstitium
9
temporal lobe
9
trophoblast
8
esophagus
8
lower leg skin
8
right lobe of liver
8
thoracic aorta
8
uterus
8
vagina
7
amygdala
7
chorion membrane
7
colonic mucosa
7
eye
7
globus pallidus
7
hypothalamus
7
midbrain
7
nucleus accumbens
7
occipital lobe
7
parathyroid adenoma
7
tongue
6
angular gyrus
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
cingulate gyrus
6
duodenal mucosa
6
gastroesophageal sphincter
6
left cardiac atrium
6
limb
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
stomach smooth muscle
6
superior temporal gyrus
6
urinary bladder
5
C1 segment of cervical spinal cord
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
medulla oblongata
5
middle frontal gyrus
5
pons
5
right cardiac atrium
5
skin of body
5
subcutaneous abdominal adipose tissue
5
umbilical cord
4
Brodmann (1909) area 46
4
bone tissue
4
cerebellar cortex
4
cortex of kidney
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
visceral abdominal adipose tissue
3
amnion
3
dorsolateral prefrontal cortex
3
embryonic facial prominence
3
femur
3
germinal matrix
3
inferior parietal cortex
3
mucosa of stomach
3
prefrontal cortex
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
arm bone
2
blood
2
breast carcinoma
2
chorion
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
forelimb muscle
2
germinal center
2
kidney epithelium
2
leg bone
2
mammary gland
2
middle frontal area 46
2
minor salivary gland
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pituitary gland
2
placental basal plate
2
rectum smooth muscle tissue
2
respiratory system smooth muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cartilage tissue
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
fetal heart
Organ
5
limb
5
musculature of body
Life stage
5
adult
Date released
3
March, 2020
2
February, 2020
Software used
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
chromatin state
Showing 5 of 5 results
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Download
FileSet
DSR809BGG
released
Annotation file set
: Fine-mapping results from DAPG of gastrocnemius medialis(Muscle - Skeletal) for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR573OQV
released
Annotation file set
: Fine-mapping results from CAVIAR of gastrocnemius medialis(Muscle - Skeletal) for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR012LHM
released
Annotation file set
: Fine-mapping results from CaVEMaN of gastrocnemius medialis(Muscle - Skeletal) for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR192JMP
released
Annotation file set
: Gene expression summary of TPM of skeletal muscle from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR222BED
released
Annotation file set
: eQTL of gastrocnemius medialis(Muscle - Skeletal) for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP