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Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
binding sites
1
accessible chromatin
1
histone modifications
1
target gene predictions
Annotation Category
7
cis-regulatory elements
1
Target gene links
Annotation type Category
6
ChIP-seq
5
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
8
cell line
Biosample term
20
lung
13
left lung
12
right lung
8
A549
7
type II pneumocyte
7
upper lobe of left lung
6
IMR-90
6
fibroblast of lung
5
PC-9
4
WI38
4
type I pneumocyte
2
lung microvascular endothelial cell
1
NCI-H226
1
NCI-H226 cell
1
NCI-H460
1
NCI-H460 cell
1
endothelial cell of artery
1
lung neuroendocrine cell
Organ
8
lung
Life stage
3
adult
Date released
September, 2022
5
February, 2021
1
June, 2020
1
May, 2021
1
October, 2022
Software used
3
encode-ccres
3
macs
1
abc
1
chromhmm
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
annotation_type!
chromatin state
biosample_term_name!
tongue
month_released!
September, 2022
Showing 8 of 8 results
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Download
FileSet
DSR259UTD
released
Annotation file set
: Binding sites annotation for A549 (A549) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR641NTB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A549
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR496BBN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A549
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR885NAO
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A549
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR761KYR
released
Annotation file set
: Histone modifications annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR378GKW
released
Annotation file set
: Binding sites annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR510YWQ
released
Annotation file set
: enhancer-gene predicton of A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR008HJP
released
Annotation file set
: Accessible chromatin annotation for Lung A549 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP