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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
differential activity
Annotation Category
5
Gene expression levels
Annotation type Category
5
single cell RNA-seq
Available data
5
tsv
File set status
5
released
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
65
kidney
32
right kidney
31
renal cortex interstitium
31
renal pelvis
27
left kidney
22
epithelial cell of proximal tubule
20
glomerular endothelial cell
12
glomerular visceral epithelial cell
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
9
right renal cortex interstitium
8
HEK293
8
kidney tubule cell
7
kidney glomerular epithelial cell
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
renal cortical epithelial cell
6
kidney epithelial cell
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Connecting Tubule Cell
5
Cortical Thick Ascending Limb Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Medullary Thick Ascending Limb Cell
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Renin-positive Juxtaglomerular Granular Cell
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
4
ACHN
4
Caki2
4
RCC 7860
4
cortex of kidney
4
kidney capillary endothelial cell
4
kidney connecting tubule epithelial cell
4
renal cell carcinoma
3
G401
3
S-shaped body
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
2
HEK293T
2
kidney epithelium
2
kidney inner medulla collecting duct intercalated cell
2
metanephros
2
renal connecting tubule
2
renal principal cell
2
ureteric bud
1
left kidney
1
RCC
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
epithelial cell of distal tubule
1
glomerular epithelium
1
kidney - cortex
1
kidney - medulla
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
nephron tubule
1
parietal epithelial cell
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal cortex tubule
1
renal glomerulus
1
renal intercalated cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
5
epithelium
5
kidney
Life stage
5
adult
Date released
5
September, 2023
Software used
3
r
2
deseq2
Lab
5
KPMP
Project
5
KPMP
RFA
5
KPMP
annotation_type!
chromatin state
biosample_term_name!
T-helper 17 cell
Showing 5 of 5 results
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Download
FileSet
DSR752ETN
released
Annotation file set
: Differential activity annotation of Degenerative Connecting Tubule Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR057CVD
released
Annotation file set
: Differential activity annotation of Degenerative Connecting Tubule Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR169AHB
released
Annotation file set
: Gene expression annotation of Degenerative Connecting Tubule Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR976ESI
released
Annotation file set
: Gene expression annotation of Degenerative Connecting Tubule Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR812LEI
released
Annotation file set
: Gene expression annotation of Degenerative Connecting Tubule Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP