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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
accessible chromatin
1
candidate regulatory elements
chromatin state
1
histone modifications
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
52
H1-hESC
18
trophoblast cell
15
H9
12
chorionic villus
9
trophoblast
8
endodermal cell
7
mesodermal cell
6
HUES8
5
CyT49
5
H7-hESC
5
HUES6
4
H4
4
HUES64
4
ectodermal cell
3
ELF-1
3
HUES48
3
UCSF-4
3
embryonic facial prominence
3
hESC H9
3
primordial germ cell
2
ES-I3
2
cardiac mesoderm primordium
2
first pancreatic bud
1
H1
1
H7
1
cardiogenic mesoderm
1
embryonic fibroblast
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
trophoblast giant cell
Organ
5
embryo
Life stage
2
embryonic
Date released
2
September, 2022
1
February, 2021
1
June, 2020
1
May, 2021
Software used
2
macs
2
r
1
abc
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
annotation_type!
chromatin state
Showing 5 of 5 results
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Download
FileSet
DSR245YQC
released
Annotation file set
: Candidate regulatory elements for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR472ULW
released
Annotation file set
: Target gene predictions for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157MZQ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486DHW
released
Annotation file set
: enhancer-gene predicton of H7 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR227UQF
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP