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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
cardiac fibroblast
2
Ammon's horn
2
CD8-positive, alpha-beta T cell
2
SGBS preadipocytes
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
cardiac muscle cell
2
caudate nucleus
2
conventional dendritic cell
2
coronary artery
2
endothelial cell
2
frontal cortex
2
heart
2
heart left ventricle
2
kidney
2
macrophage
2
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
natural killer cell mediated cytotoxicity
2
non-classical monocyte
2
omental fat pad
2
pancreas
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
pancreatic stellate cell
2
plasmacytoid dendritic cell
2
putamen
2
regulatory T cell
2
right atrium auricular region
2
stellate neuron
2
tibial artery
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
adipose tissue
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
body of pancreas
1
brain
1
brain microvascular endothelial cell
1
brain pericyte
1
cerebellar cortex
1
cerebellum
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
fetal heart
1
forelimb muscle
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hepatic stellate cell
1
hepatocyte
1
hypothalamus
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left renal pelvis
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
nucleus accumbens
1
occipital lobe
1
pons
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
retinal pigment epithelial cell
1
right lobe of liver
1
right renal pelvis
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
subcutaneous adipose tissue
1
substantia nigra
1
superior temporal gyrus
1
tibial nerve
Organ
1
connective tissue
Date released
3
November, 2022
2
January, 2020
1
June, 2020
0
January, 2021
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
chromatin state
Showing 2 of 2 results
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Download
FileSet
DSR742XWK
released
Annotation file set
: Preadipose SGBS cell line accessible chromatin annotation
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR780QAJ
released
Annotation file set
: SGBS differentiated adipocytes accessible chromatin annotation
Lab:
AMP-T2D consortium
Project:
AMP