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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
H3K27ac ChIP-Seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
primary cell
1
cell line
Biosample term
59
HeLa-S3
52
H1-hESC
51
heart
50
kidney
46
stomach
45
neural progenitor cell
42
brain
41
A549
41
islet of Langerhans
35
lung
34
adrenal gland
34
liver
34
muscle of arm
34
placenta
34
retina
34
small intestine
33
K562
29
large intestine
29
muscle of leg
28
thymus
26
left lung
26
muscle of back
24
adipose tissue
24
hematopoietic multipotent progenitor cell
23
EndoC_BH1
23
right lung
22
right kidney
21
renal pelvis
21
spinal cord
20
breast cancer cell
20
heart left ventricle
20
pigmented layer of retina
20
renal cortex interstitium
19
HFFc6
19
spleen
18
left kidney
18
subcutaneous adipose tissue
17
MCF-7
17
tibial nerve
16
body of pancreas
16
coronary artery
16
induced pluripotent stem cell
16
right atrium auricular region
15
caudate nucleus
15
pancreas
14
HepG2
14
adipocyte
14
tibial artery
13
GM12878
13
frontal cortex
13
sigmoid colon
12
cerebellum
12
lymphoblastoid cell line
12
neuroblastoma cell
12
ovary
11
ascending aorta
11
embryonic stem cell
11
omental fat pad
11
psoas muscle
11
putamen
11
substantia nigra
11
thyroid gland
10
Ammon's horn
10
Rhabdomyosarcoma
10
gastric cancer cell
10
progenitor cell of endocrine pancreas
10
testis
10
transverse colon
9
H9
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
gastrocnemius medialis
9
heart right ventricle
9
layer of hippocampus
9
liposarcoma
9
lymphocyte
9
prostate gland
8
B-lymphoblastoid cell line
8
fibroblast cell line
8
muscle of trunk
8
pituitary stalk
8
skeletal muscle tissue
7
GM19240
7
IMR-90
7
Jurkat
7
NAMALWA cell
7
Peyer's patch
7
amygdala
7
cardiomyocytes (cardiac muscle cell)
7
endocrine pancreas
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
mesenchymal stem cell
7
trophoblast
7
upper lobe of left lung
6
22Rv1
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Caco-2 cell
6
Chondroid Chordoma
6
GM06990
6
GM12864
6
GM12865
6
GM19238
6
GM19239
6
HAP-1
6
HEK293
6
HL-60
6
HT-29
6
HUES8
6
KARPAS-422 cell
6
LoVo cell
6
MM.1S
6
NT2-D1 cell
6
OCI-LY7
6
PC-9
6
Rh-4 cell
6
SGBS preadipocytes
6
SK-N-MC
6
SK-N-SH
6
anterior cingulate cortex
6
aorta
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
endometrium adenocarcinoma
6
globus pallidus
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
immortal human breast epithelial cell line cell
6
mesendoderm
6
neuroblastoma cell line
6
nucleus accumbens
6
occipital lobe
6
pancreatic ductal cell
5
C1 segment of cervical spinal cord
5
CMK
5
CyT49
5
Ewing sarcoma
5
GM12875
5
GM12891
5
GM12892
5
GM18507
5
GM23248
5
H7-hESC
5
HCT-116 cell
5
HuH-7
5
LHCN-M2
5
MG63
5
PC-3
5
RPMI8226
5
RS4-11 cell
5
RWPE1
5
SK-N-DZ
5
SW480
5
T-cell acute lymphoblastic leukemia
5
WERI-Rb-1
5
acute myeloid leukemia
5
cardiac muscle cell
5
chorion membrane
5
chorionic villus
5
esophagus
5
osteosarcoma
5
prostate cancer cell line
5
right renal cortex interstitium
5
right renal pelvis
4
B cell
4
Brodmann (1909) area 46
4
COLO205
4
Daoy
4
GM08714
4
GM10248
4
GM10266
4
GM18505
4
GM19099
4
GM19193
4
HAC cell
4
HBMEC cell
4
HCT116
4
HK-2 cell
4
HS-SY-2 cell
4
HUES6
4
KBM-7
4
LNCAP
4
LNCaP clone FGC
4
MDA-MB-231 cell
4
Mantle cell lymphoma
4
NCCIT cell
4
NHEK
4
Normal Human Astrocytes
4
OCI-LY1
4
PANC-1 cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
SJSA1
4
SK-N-SH_RA
Date released
1
May, 2021
Software used
1
abc
Lab
1
Jesse Engreitz, Stanford University
Project
1
AMP
RFA
1
AMP
annotation_type!
chromatin state
biosample_type!
primary cell
software_used.software.name!
encode-ccres
Showing 1 of 1 results
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Download
FileSet
DSR303OXY
released
Annotation file set
: enhancer-gene predicton of THP-1_monocyte-VanBortle2017 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP