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Schema
Clear Filters
Annotation type
3
target gene predictions
2
candidate regulatory elements
chromatin state
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
5
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
2636
whole blood
135
monocyte
93
fibroblast
91
endothelial cell
89
heart
88
stomach
86
head of caudate nucleus
79
kidney
74
macrophage
72
CD8-positive, alpha-beta T cell
71
brain
69
smooth muscle cell
68
T-cell
68
muscle of arm
68
placenta
66
lung
65
HeLa-S3
63
adrenal gland
61
CD4-positive, alpha-beta T cell
61
small intestine
59
dorsolateral prefrontal cortex
58
A549
58
B cell
57
large intestine
56
muscle of back
56
muscle of leg
55
stimulated activated CD4-positive, alpha-beta T cell
54
left lung
53
common myeloid progenitor, CD34-positive
52
H1-hESC
50
hepatocyte
48
natural killer cell
48
neural progenitor cell
48
posterior cingulate gyrus
46
thymus
45
hematopoietic multipotent progenitor cell
45
right lung
42
islet of Langerhans
42
renal cortex interstitium
42
right kidney
41
K562
41
T cell
41
liver
41
renal pelvis
40
adipocyte
40
retina
37
cardiac muscle cell
36
heart left ventricle
36
left kidney
35
CD14-positive monocyte
34
pericyte
34
spinal cord
33
activated CD4-positive, alpha-beta T cell
33
spleen
32
glutamatergic neuron
31
pancreatic ductal cell
30
astrocyte
29
T-helper 1 cell
29
keratinocyte
29
naive thymus-derived CD4-positive, alpha-beta T cell
28
CD4-positive, alpha-beta memory T cell
28
MCF-7
26
ovary
26
pancreas
25
T-helper 17 cell
25
adipose tissue
25
epithelial cell of proximal tubule
25
stimulated activated CD8-positive, alpha-beta memory T cell
24
body of pancreas
24
dendritic cell
24
endothelial cell of lymphatic vessel
24
heart right ventricle
23
EndoC_BH1
23
neuron
23
pericyte cell
23
regulatory T cell
22
GABAergic neuron
22
H9
22
T-helper 2 cell
22
naive thymus-derived CD8-positive, alpha-beta T cell
21
HCT116
21
foreskin fibroblast
21
glomerular endothelial cell
21
trophoblast cell
20
breast cancer cell
20
foreskin keratinocyte
20
gastrocnemius medialis
20
sigmoid colon
20
tibial nerve
20
upper lobe of left lung
19
CD8-positive, alpha-beta memory T cell
19
HFFc6
19
caudate nucleus
19
endocardial cell
19
right atrium auricular region
19
subcutaneous adipose tissue
18
coronary artery
18
hepatic stellate cell
18
mast cell
18
pancreatic beta cell
18
pigmented layer of retina
18
testis
18
thyroid gland
17
HepG2
17
mesenchymal stem cell
17
omental fat pad
17
osteoblast
17
psoas muscle
17
tibial artery
17
transverse colon
16
endothelial cell of hepatic sinusoid
16
endothelial cell of umbilical vein
16
induced pluripotent stem cell
15
GM12878
15
activated T-cell
15
ascending aorta
15
erythroblast
15
frontal cortex
15
muscle of trunk
15
pancreatic acinar cell
15
pancreatic alpha cell
15
pancreatic delta cell
14
activated CD8-positive, alpha-beta memory T cell
14
left renal cortex interstitium
14
left renal pelvis
14
mammary epithelial cell
14
mononuclear cell
14
retinal pigment epithelial cell
13
Peyer's patch
13
cerebellum
13
excitatory neuron
13
fibroblast of cardiac tissue
13
naive B cell
13
neuronal stem cell
13
right renal pelvis
13
skeletal muscle myoblast
13
skeletal muscle satellite cell
12
bronchial epithelial cell
12
embryonic stem cell
12
fibroblast of lung
12
glomerular visceral epithelial cell
12
layer of hippocampus
12
lymphoblastoid cell line
12
neuroblastoma cell
12
putamen
11
Ammon's horn
11
breast epithelium
11
chorionic villus
11
mammary gland epithelial cell
11
neutrophil
11
progenitor cell of endocrine pancreas
11
prostate gland
11
substantia nigra
10
Rhabdomyosarcoma
10
dermis blood vessel endothelial cell
10
endocrine pancreas
10
epithelial cell of prostate
10
fibroblast of dermis
10
gastric cancer cell
10
mesothelial cell
10
thyroid follicular cell
9
IMR-90
9
aorta
9
cardiomyocytes
9
choroid plexus epithelial cell
9
diffuse intrinsic pontine glioma
9
liposarcoma
9
lymphocyte
9
megakaryocyte
9
memory B cell
9
progenitor cell
9
right lobe of liver
9
skeletal muscle tissue
8
B Cell
8
GM06990
8
HT-29
8
PC-9
8
SK-N-DZ
8
SK-N-MC
8
SK-N-SH
8
WERI-Rb-1
8
WI38
8
colonic mucosa
8
esophagus
8
esophagus muscularis mucosa
8
eye
8
fibroblast cell line
8
foreskin melanocyte
8
kidney tubule cell
8
limb
8
lower leg skin
8
pituitary stalk
8
right renal cortex interstitium
8
tongue
7
B-lymphoblastoid cell line
7
GM12865
7
HAP-1
7
HEK293
7
OCI-LY7
7
Schwann cell
Organ
4
skin of body
Life stage
2
newborn
1
postnatal
Date released
2
September, 2022
1
February, 2021
1
July, 2026
1
May, 2021
Software used
2
r
1
abc
1
encode-ccres
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
Collection Tags
2
EpiMap
1
DGA
1
ENCODE
1
ENCODE-rE2G
RFA
5
AMP
annotation_type!
chromatin state
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR417820
released
Annotation file set
: Target gene predictions for iPS DF 19.11 (EFO:0007096) derived from ENCODE-rE2G (ENCSR772VHZ).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895SKI
released
Annotation file set
: Candidate regulatory elements for BSS00731 iPS DF 19.11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR985UCV
released
Annotation file set
: Target gene predictions for BSS00731 iPS DF 19.11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR584ZJC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iPS DF 19.11
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR544HLF
released
Annotation file set
: enhancer-gene predicton of iPS_DF_19.11_Cell_Line-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP